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RIKEN DNA Bank Mouse Resource - Msh6

Gene ID NCBI Gene 17688 |  KEGG mmu:17688
Gene Symbol Msh6
Protein Name mutS homolog 6
Synonyms AU044881|AW550279|GTBP|Gtmbp
Ortholog resources KEGG ortholog (KEGG orthology K08737) in the DNA Bank
Featured content DNA repair (mouse)
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB14049 pMXs-mMsh6 Retroviral expression vector of mouse Msh6.

RDB_org_190226.csv


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH049604 H3124A04 pSPORT1 BG086280 BG073552  
MCH106530 H4066F10 pSPORT1 BQ560821  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 17688] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2019.07.19

Mus_musculus_gene_info171028.csv - RDB_mmu_GIxxxxxxxxx_html_190501.pl