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RIKEN DNA Bank Mouse Resource - Itga4

Gene ID (NCBI) 16401
Gene Symbol Itga4
Protein Name integrin alpha 4
Synonyms CD49D|Itga4B
Databases KEGG mmu:16401 |  NCBI Gene 16401
Featured content Intestinal immune network for IgA production - mouse
Featured content Ortholog resources in the DNA Bank (KEGG orthology K06483)


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH012951 H3032G07 pSPORT1 BG078849 BG065572  
MCH034830 H3087B06 pSPORT1 BG083337 BG070418  
MCH040130 H3100F10 pSPORT1 BG071576  
MCH110854 H4077C06 pSPORT1 BQ562672 BQ562671  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 16401] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2018.06.19

Mus_musculus_gene_info171028.csv - RDB_mmu_GIxxxxxxxxx_html_180123.pl