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RIKEN DNA Bank Mouse Resource - Hsph1

Gene ID NCBI Gene 15505 |  KEGG mmu:15505
Gene Symbol Hsph1
Protein Name heat shock 105kDa/110kDa protein 1
Synonyms 105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105
Ortholog resources KEGG ortholog (KEGG orthology K09485) in the DNA Bank
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH008097 H3020E01 pSPORT1 BG077915 BG064500  
MCH019631 H3049B07 pSPORT1 BG066973  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 15505] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl