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RIKEN DNA Bank Mouse Resource - Gapdh

Gene ID NCBI Gene 14433 |  KEGG mmu:14433
Gene Symbol Gapdh
Protein Name glyceraldehyde-3-phosphate dehydrogenase
Synonyms Gapd
Ortholog resources KEGG ortholog (KEGG orthology K00134) in the DNA Bank
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NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH012507 H3031E11 pSPORT1 BG078754 BG065476  
MCH058830 H3147B06 pSPORT1 BG087977 BG075431  
MCH010131 H3025F11 pSPORT1 BG064950  
MCH028808 H3072A08 pSPORT1 BG082061 BG069037 done
MCH004811 H3012A11 pSPORT1 BG077190 BG063729  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 14433] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -