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RIKEN DNA Bank Mouse Resource - Fdft1

Gene ID NCBI Gene 14137 |  KEGG mmu:14137
Gene Symbol Fdft1
Protein Name farnesyl diphosphate farnesyl transferase 1
Synonyms SQS|SS
Ortholog resource in our bank

  Fdft1


External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB01624 pMMSS-2 Plasmid clone of mouse squalene synthase cDNA
RDB02534 pAxCAmSQUE (forward) Shuttle vector to produce rAd expressing mous squalene epoxidase (SQUE)
RDB02535 pAxCAmSQUE (reverse) Shuttle vector to generate rAd harboring mous SQUE
RDB02768 AxCAmSQUE (forward) Recombinant adenovirus harboring mouse squalene epoxidase cDNA

webcatalog20220516.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH029379 H3073H11 pSPORT1 BG082232 BG069211  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2023May31.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 14137] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2023.08.17

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl