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RIKEN DNA Bank Mouse Resource - Ctsl

Gene ID (NCBI) 13039
Gene Symbol Ctsl
Protein Name cathepsin L
Synonyms 1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt
Databases KEGG mmu:13039 |  NCBI Gene 13039
Featured content Lysosome (mouse)
Featured content Apoptosis - mouse
Featured content Ortholog resources in the DNA Bank (KEGG orthology K01365)


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH011323 H3028F03 pSPORT1 BG078496 BG065219  
MCH011324 H3028F04 pSPORT1 BG078497 BG065220  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 13039] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2018.03.01

Mus_musculus_gene_info171028.csv - RDB_mmu_GIxxxxxxxxx_html_180123.pl