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RIKEN DNA Bank Mouse Resource - Ctsb

Gene ID NCBI Gene 13030 |  KEGG mmu:13030
Gene Symbol Ctsb
Protein Name cathepsin B
Synonyms CB
Ortholog resources KEGG ortholog (KEGG orthology K01363) in the DNA Bank
Featured content Lysosome (mouse)
Featured content Apoptosis - mouse
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB18953 pMXs-AMNN-Puro-mCherry-CTSB Retroviral expression vector of mouse cathepsin B (CTSB).

webcatalog20210331.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH021354 H3053G10 pSPORT1 BG080451 BG067383  
MCH012106 H3030E10 pSPORT1 BG078674 BG065392  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2021Apr04.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 13030] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2021.08.24

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_210401.pl