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RIKEN DNA Bank Mouse Resource - Cdh2

Gene ID NCBI Gene 12558 |  KEGG mmu:12558
Gene Symbol Cdh2
Protein Name cadherin 2
Synonyms CDHN|N-CAD|Ncad
Ortholog resources KEGG ortholog (KEGG orthology K06736) in the DNA Bank
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Individualy Deposited Resource

Catalog number Name of Resource Description
RDB01186 Mouse N-cadherin cDNA full length Mouse N-cadherin cDNA
RDB01243 mNCAD Mouse NCAD (Partial), N-cadherin, genomic DNA

webcatalog20210331.tab


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH056573 H3141H05 pSPORT1  
MCH052504 H3131E08 pSPORT1 BG086865 BG074167  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2021Apr04.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 12558] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2021.12.15

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_210401.pl