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RIKEN DNA Bank Mouse Resource - Cdh1

Gene ID (NCBI) 12550
Gene Symbol Cdh1
Protein Name cadherin 1
Synonyms AA960649|E-cad|Ecad|L-CAM|UVO|Um
Databases KEGG link 01 |  NCBI Gene link 01
Featured content Hippo signaling (mouse)
Featured content Ortholog resources in the DNA Bank (KEGG orthology K05689)

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB01184 Mouse E-cadherin full length cDNA Mouse E-cadherin cDNA
RDB12215 Ecad-Flag/pCAG Expression clone of mouse E-cadherin
RDB12216 E-Cadherin-delta C-Flag/pCAG Expression clone of mouse E-cadherin, C-terminal deletion


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH020170 H3050H02 pSPORT1 BG080196 BG067123  
MCH030430 H3076B06 pSPORT1 BG082434 BG069329  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 12550] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


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