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RIKEN DNA Bank Mouse Resource - Ctnna1

Gene ID NCBI Gene 12385 |  KEGG mmu:12385
Gene Symbol Ctnna1
Protein Name catenin (cadherin associated protein), alpha 1
Synonyms 2010010M04Rik|AA517462|AI988031|Catna1
Ortholog resources KEGG ortholog (KEGG orthology K05691) in the DNA Bank
Featured content Hippo signaling (mouse)
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH007304 H3018E08 pSPORT1 BG077688 BG064349  
MCH017745 H3044G01 pSPORT1 BG079756 BG066669  
MCH018980 H3047H12 pSPORT1 BG080026 BG066871  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 12385] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2020.07.11

Mus_musculus_gene_info200108.csv - RDB_mmu_GIxxxxxxxxx_html_191217.pl