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RIKEN DNA Bank Mouse Resource - Atp6v1a

Gene ID NCBI Gene 11964 |  KEGG mmu:11964
Gene Symbol Atp6v1a
Protein Name ATPase, H+ transporting, lysosomal V1 subunit A
Synonyms AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2
Ortholog resources KEGG ortholog (KEGG orthology K02145) in the DNA Bank

  KEGG gene

  KEGG Ortholog

  NCBI Gene

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH008507 H3021E11 pSPORT1 BG077838 BG064589  
MCH037303 H3093E07 pSPORT1 BG083909 BG070994  
MCH008505 H3021E09 pSPORT1 CK334392  
MCH036969 H3092H01 pSPORT1 BG083849 BG070846  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 11964] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


Mus_musculus_gene_info200108.csv -