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RIKEN DNA Bank Mouse Resource - Atp2a2

Gene ID (NCBI) 11938
Gene Symbol Atp2a2
Protein Name ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Synonyms 9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|mKIAA4195
Databases KEGG link 01 |  NCBI Gene link 01
Featured content Ortholog resources in the DNA Bank (KEGG orthology K05853)


NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH037653 H3094C05 pSPORT1 BG084053 BG071059  
MCH043728 H3109F08 pSPORT1 CK334778 CK334777  
MCH001609 H3004A09 pSPORT1 BG076647 BG063183  
MCH043727 H3109F07 pSPORT1 BG085195 BG072362  
MCH052034 H3130B10 pSPORT1 BG086757 BG074044  
MCH102580 H4056H12 pSPORT1 BQ559233  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_170401.csv


Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 11938] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.


2017.08.24

Mus_musculus_gene_info140110 - RDB_mmu_GIxxxxxxxxx_html_170416.pl