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RIKEN DNA Bank Human Resource - PNPT1

Gene ID NCBI Gene 87178 |  KEGG hsa:87178
Gene Symbol PNPT1
Protein Name polyribonucleotide nucleotidyltransferase 1
Synonyms COXPD13|DFNB70|OLD35|PNPASE|old-35
Ortholog resource in our bank

  PNPT1

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX046221 IRAK115J05 pCMV-SPORT6 BC053660 NM_033109
HGX001712 IRAK004E16 pCMV-SPORT6 BC000862 NM_033109 Partial
HGY088545 IRAL021G01 pDNR-LIB BC005986 NM_033109 Partial
HGY092520 IRAL031E24 pDNR-LIB BC021170 NM_033109 Partial

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE080836 M01C002B12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE080884 M01C002D12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE080932 M01C002F12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE080980 M01C002H12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE081028 M01C002J12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE081076 M01C002L12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE081124 M01C002N12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE081172 M01C002P12 pDONR221 04-134-2_1-H06 BC053660 ENST00000260604  
HGE095246 M01C038B22 pDONR221 MGC08-H11 BC053660 ENST00000260604  
HGE095294 M01C038D22 pDONR221 MGC08-H11 BC053660 ENST00000260604  
HGE095342 M01C038F22 pDONR221 MGC08-H11 BC053660 ENST00000260604  
HGE095390 M01C038H22 pDONR221 MGC08-H11 BC053660 ENST00000260604  
HGE095438 M01C038J22 pDONR221 MGC08-H11 BC053660 ENST00000260604  
HGE095486 M01C038L22 pDONR221 MGC08-H11 BC053660 ENST00000260604  
HGE095534 M01C038N22 pDONR221 MGC08-H11 BC053660 ENST00000260604  
HGE095582 M01C038P22 pDONR221 MGC08-H11 BC053660 ENST00000260604  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR219689 ARiS049D17 pGCAP10 NM_033109.3  
GGCCGGGTGTCATGGCNNCCTGCANGTACTGCTGCTCGTGCCTCCGGCTCCGGCCCCTGA

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.08

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl