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RIKEN DNA Bank Human Resource - TRPT1

Gene ID NCBI Gene 83707 |  KEGG hsa:83707
Gene Symbol TRPT1
Protein Name tRNA phosphotransferase 1
Synonyms -
Ortholog resource in our bank

  TRPT1

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY085935 IRAL014N23 pOTB7 BC005133 NM_031472

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE098427 M01C046B03 pDONR221 MGC12-G02 BC005133 NM_031472  
HGE098475 M01C046D03 pDONR221 MGC12-G02 BC005133 NM_031472  
HGE098523 M01C046F03 pDONR221 MGC12-G02 BC005133 NM_031472  
HGE098571 M01C046H03 pDONR221 MGC12-G02 BC005133 NM_031472  
HGE098619 M01C046J03 pDONR221 MGC12-G02 BC005133 NM_031472  
HGE098667 M01C046L03 pDONR221 MGC12-G02 BC005133 NM_031472  
HGE098715 M01C046N03 pDONR221 MGC12-G02 BC005133 NM_031472  
HGE098763 M01C046P03 pDONR221 MGC12-G02 BC005133 NM_031472  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR065650 ARe64C02 pKA1U5 NM_031472.2  
GGCCTCCCGGACCACCCTGCGGGGCGCACCAGCGATCTGGGGTGCGGGGCTCGGCCTCCC
HKR069322 ARe73F02 pKA1U5 NM_031472.2  
GGGTCCGTCGGCACGTCGGCCCTGCCTCCCGGACCANCCTGCGGGGCGCACCAGCGATCT
HKR076808 ARe92A08 pKA1U5 NM_031472.2  
GGCCCCGACGCTTCCGCCCGGTCCGTCGGCACGTCGGCCCTGCCTCCCGGACCACCCTGC
HKR325749 RBb14G05 pKA1U5 NM_031472.2  
GGACGCTTCCGCCCGGTCCGATCGGCACGTCGGCCCTTTCCTCCCGGACCACCCTGCGGG
HKR347674 RBb69D02 pGCAP1 NM_031472.2  
GGTCCCCGCCGCCCCGACGCTTCCGCCCGGTCCGTCGGCACGTCGGCCCTGCCTCCCGGA
HKR430245 RBdS075K05 pGCAP10 NM_031472.2  
GCTGCCTCCCGGACCACCCTGCGGGGCGCACCAGCGATCTGGGGTGCGGGGCTCGGCCTC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.08

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl