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RIKEN DNA Bank Human Resource - PRPF40A

Gene ID NCBI Gene 55660 |  KEGG hsa:55660
Gene Symbol PRPF40A
Protein Name pre-mRNA processing factor 40 homolog A
Synonyms FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40
Ortholog resource in our bank

  PRPF40A

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB04462 SEREX clone BRC-Co-14 #1 SEREX clone BRC-Co-14 #1

webcatalog20220516.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX010682 IRAK026L18 pCMV-SPORT6 BC027178 XM_943711 Partial/var
HGX069963 IRAK174P03 pCMV-SPORT6 BC073138
HGY082698 IRAL006M10 pOTB7 BC000273 XM_943711 Partial/var
HGY091080 IRAL027L16 pOTB7 BC011788 XM_943711 Partial/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Jun29.csv
GNP_full_IRAL_2023Jun29.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE013764 W01A034G20 pENTR-TOPO IRAK026L18 BC027178 XM_943711  
HGE013766 W01A034G22 pENTR-TOPO IRAK026L18 BC027178 XM_943711  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

2023.10.11

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl