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RIKEN DNA Bank Human Resource - SENP6

Gene ID NCBI Gene 26054 |  KEGG hsa:26054
Gene Symbol SENP6
Protein Name SUMO specific peptidase 6
Synonyms SSP1|SUSP1
Ortholog resource in our bank

  SENP6

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY013947 IRAK034O11 pBluescriptR BC028583 NM_015571 Full/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE089617 M01C024A17 pDONR221 MGC01-E09 BC028583 ENST00000370014  
HGE089665 M01C024C17 pDONR221 MGC01-E09 BC028583 ENST00000370014  
HGE089713 M01C024E17 pDONR221 MGC01-E09 BC028583 ENST00000370014  
HGE089761 M01C024G17 pDONR221 MGC01-E09 BC028583 ENST00000370014  
HGE089809 M01C024I17 pDONR221 MGC01-E09 BC028583 ENST00000370014  
HGE089857 M01C024K17 pDONR221 MGC01-E09 BC028583 ENST00000370014  
HGE089905 M01C024M17 pDONR221 MGC01-E09 BC028583 ENST00000370014  
HGE089953 M01C024O17 pDONR221 MGC01-E09 BC028583 ENST00000370014  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR340153 RBb50G09 pGCAP1 NM_015571.2  
TAgAGACCTCGCCGCTCCGGCGCGGCGGGATGCGGACCATTTTACNTGCCTGGGACGAAG

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl