RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - GABARAPL2

Gene ID	NCBI Gene 11345 \| KEGG hsa:11345
Gene Symbol	GABARAPL2
Protein Name	GABA type A receptor associated protein like 2
Synonyms	ATG8\|ATG8C\|GATE-16\|GATE16\|GEF-2\|GEF2
Featured content	Autophagy (human)
Featured content	Mitophagy - human

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Ortholog resource in our bank

GABARAPL2

External database

human GABARAPL2

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB19201	pcDNA3.1 3xFLAG::GABARAPL2	Expression vectors of human ATG8 homolog GABARAPL2 tagged with 3xFLAG at N-terminus.

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGY013237	IRAK033B13	pBluescriptR	BC014594	NM_007285	Full
HGY025502	IRAK063M14	pBluescriptR	BC029601	NM_007285	Full
HGY029054	IRAK072K14	pBluescriptR	BC040312	NM_007285	Partial
HGY088524	IRAL021F04	pDNR-LIB	BC005985	NM_007285	Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR052055	ARe30C07	pKA1U5	NM_007285.6
HKR052055	GGTCGCTGCCGCTGCCGCTGCCGCCGTCGTTGTTGTTGTGCTCGGTGCGCTGAGCTCCGC
HKR058927	ARe47F07	pKA1U5	NM_007285.6
HKR058927	GAGTCGCCGCCGNTCGCTGCCGCTGCCGCTGCCGCCGTTCGTTGTTGTTGTGCTCGGTGC
HKR072951	ARe82G07	pKA1U5	NM_007285.6
HKR072951	GGTAGTCGCCGCCGNTCGCTGCCGCTGCCGCTGCCGCCGNTCGNTTGTTGTTGTGCTCGG
HKR222158	ARiS055G14	pGCAP10	NM_007285.6
HKR222158	GGCTGCCGCCGTCGTTGTTGTTGTGCTCGGTGCGCTGAGCTCCGCGGCTCCGCGAGCCGG
HKR222233	ARiS055J17	pGCAP10	NM_007285.6
HKR222233	GTGTAGTCGCCGCCGTCGCTGCCGCTGCCGCTGCCGCCGTCGTTGTTGTTGTGCTCGGTG
HKR248912	ARiS122E16	pGCAP10	NM_007285.6
HKR248912	TTCAGTCGCCGCCGTCGCTGCCGCTGCCGCTGCCGCCGTCGTTGTTGTTGTGCTCGGTGC
HKR364504	RBd11E08	pGCAP10	NM_007285.6
HKR364504	GCTGCCGTGTAGTCGCCGCCGTCGCTGCCGCTGCCGCTGCCGCCGTCGTTGTTGTTGTGC
HKR396853	RBd92C05	pGCAP10	NM_007285.6
HKR396853	GAGTCGCCGCCGTCGCTGCCGCTGCCGCTGCCGCCGTCGTTGTTGTTGTGCTCGGTGCGC
HKR403127	RBdS007N15	pGCAP10	NM_007285.6
HKR403127	GAGTCGCCGCCGTCGCTGCCGCTGCCGCTGCCGCCGTCGTTGTTGTTGTGCTCGGTGCGC
HKR470978	RBdS177H10	pGCAP10	NM_007285.6
HKR470978	GCTGCCGTGTAGTCGCCGCCGTCGCTGCCGCTGCCGCTGCCGCCGTCGTTGTTGTTGTGC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2024May11.csv
NRCDhumcloneList_RB_2024May11.csv

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Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl