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RIKEN DNA Bank Human Resource - TREX1

Gene ID NCBI Gene 11277 |  KEGG hsa:11277
Gene Symbol TREX1
Protein Name three prime repair exonuclease 1
Synonyms AGS1|CRV|DRN3|HERNS
Ortholog resource in our bank

  TREX1

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX008351 IRAK020O15 pCMV-SPORT6 BC020563 NM_032166 Full
HGY013576 IRAK033P16 pBluescriptR BC030597 NM_130384 Partial/var
HGX017094 IRAK042M06 pCMV-SPORT6 BC019863 NM_033629 Partial
HGY086309 IRAL015M21 pOTB7 BC002903 NM_032166 Partial/var
HGY092022 IRAL030A22 pOTB7 BC014153 NM_032166 Full/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE016690 W01A041M02 pENTR-TOPO IRAL030A22 BC014153 NM_032166  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR279390 ARiS198H22 pGCAP10 NM_033629.2  
GGatCtGCCttgaGGAAGGAGCCCtGCCCtGCCtGtGGAATtGTCCTGAGTCATTGCTTT

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl