RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - SEC61B

Gene ID	NCBI Gene 10952 \| KEGG hsa:10952
Gene Symbol	SEC61B
Protein Name	SEC61 translocon subunit beta
Synonyms	-

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Ortholog resource in our bank

SEC61B

External database

human SEC61B

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB19411	pFX-SECFP-Sec61 beta	Expression vector of SECFP with ER-targeting sequence (human SEC61B) in mammalian cells.	NM_006808.3	full cds

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGY082624	IRAL006J08	pOTB7	BC001734	NM_006808

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE097204	M01C043A04	pDONR221	MGC11-B02	BC001734	NM_006808
HGE097252	M01C043C04	pDONR221	MGC11-B02	BC001734	NM_006808
HGE097300	M01C043E04	pDONR221	MGC11-B02	BC001734	NM_006808
HGE097348	M01C043G04	pDONR221	MGC11-B02	BC001734	NM_006808
HGE097396	M01C043I04	pDONR221	MGC11-B02	BC001734	NM_006808
HGE097444	M01C043K04	pDONR221	MGC11-B02	BC001734	NM_006808
HGE097492	M01C043M04	pDONR221	MGC11-B02	BC001734	NM_006808
HGE097540	M01C043O04	pDONR221	MGC11-B02	BC001734	NM_006808

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2024May11.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR040947	ARe02G03	pKA1U5	NM_006808.2
HKR040947	GGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCNTTTAGGCACTAACGTGGGATCCT
HKR079230	ARe98B06	pKA1U5	NM_006808.2
HKR079230	GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR164007	ARi10A07	pGCAP10	NM_006808.2
HKR164007	GAGTCAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGT
HKR173725	ARi34F05	pGCAP10	NM_006808.2
HKR173725	GGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGCGCCTTG
HKR222250	ARiS055K10	pGCAP10	NM_006808.2
HKR222250	GGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGCGCCTTG
HKR234199	ARiS085I07	pGCAP10	NM_006808.2
HKR234199	GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR321369	RBb03H01	pKA1U5	NM_006808.2
HKR321369	GCTTTTTTCGGGGGCTCCGTAACTTTCTATCCCTCNTCGATCAGCGCCTTGCCACCCTCA
HKR327257	RBb18C09	pKA1U5	NM_006808.2
HKR327257	GGTCCGCGTCAGCGCCTTGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCCAGTGGC
HKR373773	RBd34H05	pGCAP10	NM_006808.2
HKR373773	GGCCTGAGTCAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTC
HKR380556	RBd51G12	pGCAP10	NM_006808.2
HKR380556	TGATCCGTCCGCGTCAGCGCCTTGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCCA
HKR388883	RBd72D11	pGCAP10	NM_006808.2
HKR388883	GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR416081	RBdS040D09	pGCAP10	NM_006808.2
HKR416081	GAGTCAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGT
HKR432455	RBdS081C07	pGCAP10	NM_006808.2
HKR432455	GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR462634	RBdS156J18	pGCAP10	NM_006808.2
HKR462634	GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR474905	RBdS187E09	pGCAP10	NM_006808.2
HKR474905	GCTATCCGTCCGCGTCAGCGCCTTGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2024May11.csv
NRCDhumcloneList_RB_2024May11.csv

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Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl