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RIKEN DNA Bank Human Resource - SEC61B

Gene ID NCBI Gene 10952 |  KEGG hsa:10952
Gene Symbol SEC61B
Protein Name SEC61 translocon subunit beta
Synonyms -
Ortholog resource in our bank

  SEC61B

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB19411 pFX-SECFP-Sec61 beta Expression vector of SECFP with ER-targeting sequence (human SEC61B) in mammalian cells.

webcatalog20220516.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence CDS status(2)
Submitted (DDBJ)(1) Refered (NCBI mRNA)
HGY082624 IRAL006J08 pOTB7 BC001734 NM_006808

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) Refered mRNA Status
Clone ID Sequence (DDBJ)
HGE097204 M01C043A04 pDONR221 MGC11-B02 BC001734 NM_006808  
HGE097252 M01C043C04 pDONR221 MGC11-B02 BC001734 NM_006808  
HGE097300 M01C043E04 pDONR221 MGC11-B02 BC001734 NM_006808  
HGE097348 M01C043G04 pDONR221 MGC11-B02 BC001734 NM_006808  
HGE097396 M01C043I04 pDONR221 MGC11-B02 BC001734 NM_006808  
HGE097444 M01C043K04 pDONR221 MGC11-B02 BC001734 NM_006808  
HGE097492 M01C043M04 pDONR221 MGC11-B02 BC001734 NM_006808  
HGE097540 M01C043O04 pDONR221 MGC11-B02 BC001734 NM_006808  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.
♦ Please visit a web site of the Life Technologies for datail of the Gateway® vector system and entry clone: http://www.invitrogen.com

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector mRNA RefSeqs/DDBJ accession(1) Status
5'-terminal sequence(2)
HKR040947 ARe02G03 pKA1U5 NM_006808.2  
GGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCNTTTAGGCACTAACGTGGGATCCT
HKR079230 ARe98B06 pKA1U5 NM_006808.2  
GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR164007 ARi10A07 pGCAP10 NM_006808.2  
GAGTCAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGT
HKR173725 ARi34F05 pGCAP10 NM_006808.2  
GGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGCGCCTTG
HKR222250 ARiS055K10 pGCAP10 NM_006808.2  
GGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGCGCCTTG
HKR234199 ARiS085I07 pGCAP10 NM_006808.2  
GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR321369 RBb03H01 pKA1U5 NM_006808.2  
GCTTTTTTCGGGGGCTCCGTAACTTTCTATCCCTCNTCGATCAGCGCCTTGCCACCCTCA
HKR327257 RBb18C09 pKA1U5 NM_006808.2  
GGTCCGCGTCAGCGCCTTGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCCAGTGGC
HKR373773 RBd34H05 pGCAP10 NM_006808.2  
GGCCTGAGTCAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTC
HKR380556 RBd51G12 pGCAP10 NM_006808.2  
TGATCCGTCCGCGTCAGCGCCTTGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCCA
HKR388883 RBd72D11 pGCAP10 NM_006808.2  
GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR416081 RBdS040D09 pGCAP10 NM_006808.2  
GAGTCAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGT
HKR432455 RBdS081C07 pGCAP10 NM_006808.2  
GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR462634 RBdS156J18 pGCAP10 NM_006808.2  
GAGTCTCGCCAGCTGCCGGTCTTTCGGGGGCTCCGTAACTTTCTATCCGTCCGCGTCAGC
HKR474905 RBdS187E09 pGCAP10 NM_006808.2  
GCTATCCGTCCGCGTCAGCGCCTTGCCACCCTCATCTCCAATATGCCTGGTCCGACCCCC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023Apr25.csv
NRCDhumcloneList_RB_2023Apr25.csv

2023.05.01

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_220215.pl