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RIKEN DNA Bank Human Resource - DDX39A

Gene ID NCBI Gene 10212 |  KEGG hsa:10212
Gene Symbol DDX39A
Protein Name DExD-box helicase 39A
Synonyms BAT1|BAT1L|DDX39|DDXL|URH49
Ortholog resource in our bank


External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX004870 IRAK012C22 pCMV-SPORT6 BC010455 NM_138998 Full
HGY080496 IRAL001D24 pOTB7 BC001009 NM_005804 Full
HGY095896 IRAL039M08 pOTB7 BC032128 NM_005804 Full/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.


Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE028990 W01A072H22 pENTR-TOPO IRAK012C22 BC010455 NM_138998  

♦ W series clone contains a stop codon.


♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR043346 ARe08G02 pKA1U5 NM_005804.2  
HKR062524 ARe56F04 pKA1U5 NM_005804.2  
HKR065371 ARe63H03 pKA1U5 NM_005804.2  
HKR082428 ARf06B04 pKA1U5 NM_005804.2  
HKR330476 RBb26D04 pGCAP1 NM_005804.2  
HKR368571 RBd21H03 pGCAP10 NM_005804.2  
HKR394969 RBd87H01 pGCAP10 NM_005804.2  
HKR396172 RBd90H04 pGCAP10 NM_005804.2  
HKR402867 RBdS007C19 pGCAP10 NM_005804.2  
HKR470852 RBdS177C04 pGCAP10 NM_005804.2  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.



Homo_sapiens_gene_info200108.csv -