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RIKEN DNA Bank Human Resource - TSPAN3

Gene ID NCBI Gene 10099 |  KEGG hsa:10099
Gene Symbol TSPAN3
Protein Name tetraspanin 3
Synonyms TM4-A|TM4SF8|TSPAN-3
Ortholog resource in our bank

  TSPAN3

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX007871 IRAK019L07 pCMV-SPORT6 BC011206 NM_005724 Full
HGY082374 IRAL005P14 pOTB7 BC000704 NM_005724 Full/var
HGY084283 IRAL010L19 pOTB7 BC009248 NM_005724 Full
HGY085423 IRAL013J07 pOTB7 BC004280 NM_005724 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv


Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE033784 W01A084H16 pENTR-TOPO flj0027m22 AK075482 NM_198902  
HGE033792 W01A084H24 pENTR-TOPO flj0027m22 AK075482 NM_198902  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.


NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR042877 ARe07D05 pKA1U5 NM_005724.4  
GGCCGCCATTGCCGCTCTCTCGGTGAGCGCAGCCCCGCATCTCCGGGCCGGGCCTTCGCG
HKR044030 ARe10B06 pKA1U5 NM_005724.4  
GGCCATTGCCGCTCTCTCGGATGAGCGCAGCCCCGCTCTCCGGGCCGGGCCTTCGCGGGC
HKR045329 ARe13F09 pKA1U5 NM_005724.4  
GGGAGGAGCGAGGCACTTGCTGGGGTCGGGGCTGCGCGACGGCGCAGGGGCTGCGGGGAG
HKR063277 ARe58D05 pKA1U5 NM_005724.4  
GGGAGCGAGGCACTTGCTGGGGTCGGGGCTGCGCGACGGCGCAGGGGCTGCGGGGAGCGC
HKR163611 ARi09A11 pGCAP10 NM_005724.4  
GGGCTGCGCGGAGGAGCGAGGCACTTGCTGGGGTCGGGGCTGCGCGACGGCGCAGGGGCT
HKR219647 ARiS049B23 pGCAP10 NM_005724.4  
GATTGCCGCTCTCTCGGTGAGCGCAGCCCCGCTCTCCGGGCCGGGCCTTCGCGGGCCACC
HKR327723 RBb19F03 pKA1U5 NM_005724.4  
GGCTGCGGGGAGCGCCGCGCAGGCCGTGCAGTTCCTAGCGAGGAGGCGCCGCCGCCATTG
HKR380881 RBd52D09 pGCAP10 NM_005724.4  
GGGCACTTGCTGGGGTCGGGGCTGCGCGACGGCGCAGGGGCTGCGGGGAGCGCCGCGCAG
HKR442355 RBdS105O19 pGCAP10 NM_005724.4  
GACTTGCTGGGGTCGGGGCTGCGCGACGGCGCAGGGGCTGCGGGGAGCGCCGCGCAGGCC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv


2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl