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RIKEN DNA Bank Human Resource - SF1

Gene ID NCBI Gene 7536 |  KEGG hsa:7536
Gene Symbol SF1
Protein Name splicing factor 1
Synonyms BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162
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  SF1

External database

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Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX027712 IRAK069E16 pCMV-SPORT6 BC038446 NM_201998 Partial
HGY080736 IRAL001N24 pOTB7 BC008724 NM_201998 Full
HGY083048 IRAL007K08 pOTB7 BC000773 NM_004630 Partial/var
HGY084271 IRAL010L07 pOTB7 BC008080 NM_201998 Full
HGY088102 IRAL020E06 pOTB7 BC011657 NM_201998 Partial/var
HGY096245 IRAL040K05 pOTB7 BC020217 NM_201998 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR047254 ARe18C06 pKA1U5 NM_004630.2  
GGAGAGGACGGGCTCCGCGCGCTCCGGCAGCGCATTCGGGTCCCCTCCCCCCGGGAGGCT
HKR161304 ARi03E08 pGCAP10 NM_004630.2  
GGGAGAAGCCGCCGCAGAGGAAAAGCAGGTGCCGGTGCCTGTCCCCGGGGGCGCCATGGC
HKR173369 ARi33H01 pGCAP10 NM_004630.2  
GGCGCCGCCGCCGCCCGCCGCGTGAGAGGACGGGCTCCGCGCGCTCCGGCAGCGCATTCG
HKR235280 ARiS088D08 pGCAP10 NM_004630.2  
GCATTCGGGTCCCCTCCCCCCGGGAGGCTTGCGAAGGAGAAGCCGCCGCAGAGGAAAAGC
HKR235407 ARiS088I15 pGCAP10 NM_004630.2  
GCATTCGGGTCCCCTCCCCCCGGGAGGCTTGCGAAGGAGAAGCCGCCGCAGAGGAAAAGC
HKR321780 RBb04H12 pKA1U5 NM_004630.2  
GAGTAACAAATGAAGTGCGCGCTGCGACACCTCCCAGTCCACCGAACTCCGCCGCCATTT
HKR327653 RBb19C05 pKA1U5 NM_004630.2  
GGCCGCCGCCGCCCGCCGCGTGAGAGGACGGGCTCCNCGCGCTCCGGCAGCGCATTCGGG
HKR330902 RBb27E06 pGCAP1 NM_004630.2  
GGCGCCGCCGCCGCCCGCCGCGTGAGAGGACGGGCTCCGCGCGCTCCGGCAGCGCATTCG
HKR367780 RBd19H12 pGCAP10 NM_004630.2  
GGCAGTAACAAATGAAGTGCGCGCTGCGACACCTCCCAGCCCACCGAACTCCGCCGCCAT
HKR368500 RBd21E04 pGCAP10 NM_004630.2  
GCTCTTTGTGCGTCTCGCGCCGCCGCCGCCCGCCGCGTGAGAGGACGGGCTCCGCGCGCT
HKR386125 RBd65F05 pGCAP10 NM_004630.2  
GAGCGCATTCGGGTCCCCTCCCCCCGGGAGGCTTGCGAAGGAGAAGCCGCCGCAGAGGAA

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl