RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - UBB

Gene ID	NCBI Gene 7314 \| KEGG hsa:7314
Gene Symbol	UBB
Protein Name	ubiquitin B
Synonyms	HEL-S-50
Featured content	Parkinson disease - human
Featured content	Mitophagy - human

Ortholog resource in our bank

  UBB

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGX032831	IRAK082B07	pCMV-SPORT6	BC038999	NM_018955	Full
HGX042812	IRAK107A12	pCMV-SPORT6	BC046123	NM_018955	Full
HGY080464	IRAL001C16	pOTB7	BC000379	NM_018955	Full
HGY090561	IRAL026G17	pOTB7	BC009301	NM_018955	Full
HGY092501	IRAL031E05	pDNR-LIB	BC015127	NM_018955	Full
HGY094286	IRAL035L22	pDNR-LIB	BC026301	NM_018955	Full
HGY096661	IRAL041K21	pDNR-LIB	BC031027	NM_018955	Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE082830	M01C007B06	pDONR221	FLJ01-D03	AK129498	NM_018955.4	Parcial/var
HGE082878	M01C007D06	pDONR221	FLJ01-D03	AK129498	NM_018955
HGE082926	M01C007F06	pDONR221	FLJ01-D03	AK129498	NM_018955
HGE082974	M01C007H06	pDONR221	FLJ01-D03	AK129498	NM_018955
HGE083022	M01C007J06	pDONR221	FLJ01-D03	AK129498	NM_018955
HGE083070	M01C007L06	pDONR221	FLJ01-D03	AK129498	NM_018955
HGE083118	M01C007N06	pDONR221	FLJ01-D03	AK129498	NM_018955
HGE083166	M01C007P06	pDONR221	FLJ01-D03	AK129498	NM_018955

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR041607	ARe04A07	pKA1U5	NM_018955.2
HKR041607	GAAGGGGCGGCTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACCNGCTT
HKR063748	ARe59G04	pKA1U5	NM_018955.2
HKR063748	TTGAGGGGCGGTTGGCTTTGTTGGGTGAGCTTNTTTGTGTCCCTGTGGGTGGACGTGGTT
HKR068103	ARe70E07	pKA1U5	NM_018955.2
HKR068103	ATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTNGTTTGTGTCCCTGTGGGTGGACGTGGT
HKR079628	ARe99B04	pKA1U5	NM_018955.2
HKR079628	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGATGGGTGGACGTGGTTG
HKR082411	ARf06A11	pKA1U5	NM_018955.2
HKR082411	ATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGNTGGGTGGACGTGG
HKR167635	ARi19B11	pGCAP10	NM_018955.2
HKR167635	GATTTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTG
HKR173604	ARi34A04	pGCAP10	NM_018955.2
HKR173604	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR176901	ARi42E05	pGCAP10	NM_018955.2
HKR176901	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR185301	ARi63E05	pGCAP10	NM_018955.2
HKR185301	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGAGAAATATNTGGTGGAANCCCNCCG
HKR205357	ARiS013G13	pGCAP10	NM_018955.2
HKR205357	GAGGGGCGGTTGGCTTNGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR208044	ARiS020B20	pGCAP10	NM_018955.2
HKR208044	TGAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTG
HKR218281	ARiS045L17	pGCAP10	NM_018955.2
HKR218281	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR235250	ARiS088C02	pGCAP10	NM_018955.2
HKR235250	GGTTGCATAAATTTGCGCTCCGCCAGCCCGGAGCATTTAGGGGCGGTTGGCTTTGTTGGG
HKR247465	ARiS118L01	pGCAP10	NM_018955.2
HKR247465	GATTTTTTTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGA
HKR260286	ARiS150L22	pGCAP10	NM_018955.2
HKR260286	GATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGG
HKR264652	ARiS161K12	pGCAP10	NM_018955.2
HKR264652	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR279469	ARiS198L05	pGCAP10	NM_018955.2
HKR279469	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR324460	RBb11C12	pKA1U5	NM_018955.2
HKR324460	ATCCTGTGATTTTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGNTGG
HKR325650	RBb14C02	pKA1U5	NM_018955.2
HKR325650	ATTTTAGGGGCGGTTGGCTTTGTTGGGTGACCNNNTTTGTNNCCCTGTGGGTCCACCTGN
HKR326977	RBb17H09	pKA1U5	NM_018955.2
HKR326977	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR330879	RBb27D07	pGCAP1	NM_018955.2
HKR330879
HKR363232	RBd08B08	pGCAP10	NM_018955.2
HKR363232	GGCATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGT
HKR364176	RBd10H08	pGCAP10	NM_018955.2
HKR364176	AGTTCCGTCGCAGCCGGGATTTGGGTCGCGGTTCTTGTTTGTGGATCGCTGTGATCGTCA
HKR373274	RBd33D02	pGCAP10	NM_018955.2
HKR373274	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR381306	RBd53E10	pGCAP10	NM_018955.2
HKR381306	GATTGTCGGGCCGGCTGGNTTTGTTGGGNGAGCTTGTTTGTGTCCCTGTGGCTGGACGTG
HKR390035	RBd75B11	pGCAP10	NM_018955.2
HKR390035	GATTTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTG
HKR390547	RBd76G03	pGCAP10	NM_018955.2
HKR390547	GGTTGCATAAATTTGCGCTCCGCCAGCCCGGAGCATTTAGGGGCGGTTGGCTTTGTTGGG
HKR396429	RBd91B05	pGCAP10	NM_018955.2
HKR396429	ATTTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGG
HKR403010	RBdS007I18	pGCAP10	NM_018955.2
HKR403010	GATTTTTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACG
HKR408820	RBdS022A20	pGCAP10	NM_018955.2
HKR408820	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR416318	RBdS040N06	pGCAP10	NM_018955.2
HKR416318	GATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGG
HKR428147	RBdS070G03	pGCAP10	NM_018955.2
HKR428147	GATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGG
HKR432686	RBdS081L22	pGCAP10	NM_018955.2
HKR432686	GGTGTCCCTGTGGGTGGACGTGGTTGGTGATTGGCAGGATCCTGGTATCCGCTAACAGGT
HKR442225	RBdS105J09	pGCAP10	NM_018955.2
HKR442225	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR461864	RBdS154K24	pGCAP10	NM_018955.2
HKR461864	GAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGG
HKR462439	RBdS156B15	pGCAP10	NM_018955.2
HKR462439	TTTTTTTTTTTTTTTTGAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGT
HKR470986	RBdS177H18	pGCAP10	NM_018955.2
HKR470986	GGCATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGT
HKR471076	RBdS177L12	pGCAP10	NM_018955.2
HKR471076	GATTTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTG
HKR475159	RBdS187O23	pGCAP10	NM_018955.2
HKR475159	GATTTAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGG

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

♦ No Approval Forms Required for Fluorescent Protein Genes Developed by Dr. Atsushi Miyawaki
♦ RIKEN BRC will be closed from December 28, 2024 through January 5, 2025 due to New Year's holidays.
♦ A bicistronic cell cycle reporter, Fucci2a (Sep 17, 2024)
♦ Monomeric Fluorescent Protein Resource, mStayGold (Dec 18, 2023)
♦ Visualization of Organelles update (Dec 18, 2023)
♦ Development of two mouse strains conditionally expressing bright luciferases (Sep 08, 2023)
♦ Autophagy and Mitophagy Updates (Aug 16, 2023)
♦ High intensity forms of luciferase and luminescent proteins from various organisms (BRC RESOURCE NEWS) (Apr 28, 2023)
♦ Plasmid of Cas9 expression/mRNA production, evaluation of the genome edit efficiency, and Knock-in donors and tags
♦ Fucci cell cycle indicator, Calcium sensor and Fluorescent and Luminescent protein resources
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RIKEN BRC 20th

2023.05.10

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl