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RIKEN DNA Bank Human Resource - TXN

Gene ID NCBI Gene 7295 |  KEGG hsa:7295
Gene Symbol TXN
Protein Name thioredoxin
Synonyms TRDX|TRX|TRX1
Ortholog resource in our bank

  TXN

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB07518 pGL4-phTXN Promoter collection, Human TXN promoter

webcatalog20220516.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX001225 IRAK003B01 pCMV-SPORT6 BC003377 NM_003329 Full
HGY099405 IRAL048I13 pDNR-LIB BC054866 NM_003329 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE086023 M01C015A23 pDONR221 FLJ05-A12 BC003377 NM_003329  
HGE086071 M01C015C23 pDONR221 FLJ05-A12 BC003377 NM_003329  
HGE086119 M01C015E23 pDONR221 FLJ05-A12 BC003377 NM_003329  
HGE086167 M01C015G23 pDONR221 FLJ05-A12 BC003377 NM_003329  
HGE086215 M01C015I23 pDONR221 FLJ05-A12 BC003377 NM_003329  
HGE086263 M01C015K23 pDONR221 FLJ05-A12 BC003377 NM_003329  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR066082 ARe65D10 pKA1U5 NM_003329.2  
GGTGCCAGTNNATAAAGGGAGAGAGCAAGCAGCGAGTCTNGAAGCTCTGTTTNGGTGCTN
HKR066924 ARe67F04 pKA1U5 NM_003329.2  
GGTGCCAGTTTATAAAGGGAGAGAGCAAGCAGCGAGTCTTGAAGCTCTGTTTGGTGCTTT
HKR070105 ARe75E09 pKA1U5 NM_003329.2  
GGCAGCGACGGGCGCGGAGGTCCGGCCGGGCGCGCGCGCCCCCGCCACACGCACGCCGGG
HKR165721 ARi14F01 pGCAP10 NM_003329.2  
GACAGCCGCTCGTCAGACTCCAGCAGCCAAGATGGTGAAGCAGATCGAGAGCAAGACTGC
HKR167771 ARi19H03 pGCAP10 NM_003329.2  
GATAAAGGGAGAGAGCAAGCAGCGAGTCTTGAAGCTCTGTTTGGTGCTTTGGATCCATTT
HKR177753 ARi44G09 pGCAP10 NM_003329.2  
GGAAGCTCTGTTTGGTGCTTTGGATCCATTTCCATCGGTCCTTACAGCCGCTCGTCAGAC
HKR188050 ARi70C02 pGCAP10 NM_003329.2  
GGAAGCTCTGTTTGGTGCTTTGGATCCATTTCCATCGGTCCTTACAGCCGCTCGTCAGAC
HKR218380 ARiS045P20 pGCAP10 NM_003329.2  
GGAAGCTCTGTTTGGTGCTTTGGATCCATTTCCATCGGTCCTTACAGCCGCTCGTCAGAC
HKR247317 ARiS118E21 pGCAP10 NM_003329.2  
GGAAGCTCTGTTTGGTGCTTTGGATCCATTTCCATCGGTCCTTACAGCCGCTCGTCAGAC
HKR321747 RBb04G03 pKA1U5 NM_003329.2  
GACACGCACGCCGGGCGTGCCAGTTTATAAAGGNAGTNNTAGCAAGCAGCGAGTCTTGAA
HKR334129 RBb35F09 pGCAP1 NM_003329.2  
AAATGTGGAGCCCCGCCCCGATCCCGGCTCGCAGGCTCCAGGGGCGGGGCGTGGCCGGGG
HKR334451 RBb36C03 pGCAP1 NM_003329.2  
TGGCCCCCGCCACACGGCACGCCCGGGGCGTGCCAGTTTATAAAGGGAGAGAGCAAGCAG
HKR336877 RBb42D05 pGCAP1 NM_003329.2  
GGCCCCCGCCACACGTCACGCCGGGCGTGCCAGNTTTATCCCCTNTGAGAGCAAGCAGCG
HKR348405 RBb71A05 pGCAP1 NM_003329.2  
GGCGCGCCCCCGCCACACGCACGCCGGGCGTGCCAGTTTATAAAGGGAGAGAGCAAGCAG
HKR361308 RBd03E12 pGCAP10 NM_003329.2  
GACGCCGGGCGTGCCAGTTTATAAAGGGAGAGAGCAAGCAGCGAGTCTTGAAGCTCTGTT
HKR368056 RBd20C08 pGCAP10 NM_003329.2  
GGACGGGCGCGGAGGTCCGGCCGGGCGCGCGCGCCCCCGCCACACGCACGCCGGGCGTGC
HKR380829 RBd52B05 pGCAP10 NM_003329.2  
GGCGCGCCCCCGCCACACGCACGCCGGGCGTGCCAGTTTATAAAGGGAGAGAGCAAGCAG
HKR380854 RBd52C06 pGCAP10 NM_003329.2  
TGGGTCGCCCGCCCACGCCGAGGGCGGGGGCGCCACTTTATTGAGGTCCAGAGCTGGCCG
HKR403120 RBdS007N08 pGCAP10 NM_003329.2  
GATTTTTCCATCGGTCCTTACAGCCGCTCGTCAGACTCCAGCAGCCAAGATGGTGAAGCA
HKR409067 RBdS022L03 pGCAP10 NM_003329.2  
GATAAAGGGAGAGAGCAAGCAGCGAGTCTTGAAGCTCTGTTTGGTGCTTTGGATCCATTT
HKR428137 RBdS070F17 pGCAP10 NM_003329.2  
GGAAGCTCTGTTTGGTGCTTTGGATCCATTTCCATCGGTCCTTACAGCCGCTCGTCAGAC
HKR442128 RBdS105F08 pGCAP10 NM_003329.2  
GGAAGCTCTGTTTGGTGCTTTGGATCCATTTCCATCGGTCCTTACAGCCGCTCGTCAGAC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.10

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl