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RIKEN DNA Bank Human Resource - TPM3

Gene ID NCBI Gene 7170 |  KEGG hsa:7170
Gene Symbol TPM3
Protein Name tropomyosin 3
Synonyms CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPM3nu|TPMsk3|TRK|hscp30
Ortholog resource in our bank

  TPM3

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX010801 IRAK027A01 pCMV-SPORT6 BC015403 NM_153649 Full
HGX069955 IRAK174O19 pCMV-SPORT6 BC072428 NM_153649 Full
HGX069981 IRAK174P21 pCMV-SPORT6 BC073144 NR_103461.2 Partial
HGY083090 IRAL007M02 pOTB7 BC000771 NM_153649 Full
HGY088498 IRAL021E02 pDNR-LIB BC008407 NM_152263 Full/var
HGY088594 IRAL021I02 pDNR-LIB BC008425 NM_152263 Full/var
HGY100520 IRAL051E24 pDNR-LIB BC062740 NM_153649 Partial/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR045680 ARe14D08 pKA1U5 NM_153649.3  
GGTGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCT
HKR058497 ARe46E01 pKA1U5 NM_153649.3  
GAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCTGGG
HKR072150 ARe80G06 pKA1U5 NM_153649.3  
GGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCTGG
HKR072877 ARe82D05 pKA1U5 NM_153649.3  
GCGGAGCGCGAGCAGTAGCTGGGTGGGCACCATGGCTGGGATCACCACCATCGAGGCGGT
HKR077350 ARe93G06 pKA1U5 NM_153649.3  
GGGAAGTAAGGGTGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCG
HKR170874 ARi27D02 pGCAP10 NM_153649.3  
GGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCTGG
HKR179228 ARi48B04 pGCAP10 NM_153649.3  
GGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCTGG
HKR322147 RBb05G03 pKA1U5 NM_153649.3  
HKR340449 RBb51C01 pGCAP1 NM_153649.3  
TTGTGAGAGGAGGCTGCAACGCCGTAGCGGAGGAGGCAGGAACCGGTAGCGCGAGCAGTT
HKR344435 RBb61B11 pGCAP1 NM_153649.3  
AGGTGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGC
HKR366804 RBd17A04 pGCAP10 NM_153649.3  
GGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCTGGGTGGG
HKR374027 RBd35B03 pGCAP10 NM_153649.3  
GGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCTGG
HKR393328 RBd83F08 pGCAP10 NM_153649.3  
GGTGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCT
HKR405789 RBdS014H21 pGCAP10 NM_153649.3  
GGTGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCT
HKR441917 RBdS104N05 pGCAP10 NM_153649.3  
GAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAGCGCGAGCAGTAGCTGGGTGGGC
HKR474957 RBdS187G13 pGCAP10 NM_153649.3  
GAGGCGGAAGTAAGGGTGAGAGGAGGCTGCAACGCCGAGCGGAGGAGGCAGGAACCGGAG

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl