RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - TNF

Gene ID	NCBI Gene 7124 \| KEGG hsa:7124
Gene Symbol	TNF
Protein Name	tumor necrosis factor
Synonyms	DIF\|TNF-alpha\|TNFA\|TNFSF2\|TNLG1F
Featured content	Sphingolipid signaling pathway (human)
Featured content	NF-kappa B signaling pathway (human)
Featured content	T cell receptor signaling pathway (human)
Featured content	Apoptosis - human
Featured content	Alzheimer disease - human
Featured content	Amyotrophic lateral sclerosis (ALS) - human
Featured content	SARS-CoV-2 relevant human genes
Featured content	Influenza A relevant genes - human

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Ortholog resource in our bank

TNF

External database

human TNF

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB07310	pGL4-phTNF	Promoter collection, Human TNF promoter
RDB01889	pRx-hTNFalpha-bsr	Human TNF alpha cDNA
RDB01477	pBluescript SKII+hTNF alpha	Human TNF-alpha cDNA
RDB01450	pMFGhTNF alpha	Recombinant retrovirus vector, human TNF-alpha cDNA expression
RDB01421	AxCAhTNF alpha	Recombinant adenovirus expressing human TNF-alpha gene
RDB01420	pAxCAhTNF alpha	Shuttle vector to generate rAd expressing human TNF-alpha cDNA

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGX025025	IRAK062J09	pCMV-SPORT6	BC028148	NM_000594	Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE013777	W01A034H09	pENTR-TOPO	IRAK062J09	BC028148	NM_000594.4	full
HGE013781	W01A034H13	pENTR-TOPO	IRAK062J09	BC028148	NM_000594
HGE013783	W01A034H15	pENTR-TOPO	IRAK062J09	BC028148	NM_000594

♦ W series clone contains a stop codon.

GNP_entry_W01A_2024May11.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

2024.10.02

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl