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RIKEN DNA Bank Human Resource - SSR2

Gene ID NCBI Gene 6746 |  KEGG hsa:6746
Gene Symbol SSR2
Protein Name signal sequence receptor subunit 2
Synonyms HSD25|TLAP|TRAP-BETA|TRAPB
Ortholog resource in our bank

  SSR2

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY080645 IRAL001K05 pOTB7 BC000341 NM_003145 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE037412 W01A093I20 pENTR-TOPO IRAL001K05 BC000341 NM_003145  
HGE045232 W01A113B08 pENTR-TOPO IRAL001K05 BC000341 NM_003145  
HGE045236 W01A113B12 pENTR-TOPO IRAL001K05 BC000341 NM_003145  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR070003 ARe75A03 pKA1U5 NM_003145.3  
GGAAAGGCGCTTTGGGATGCCAACGATGAGGCTGCCTGTTCATTTGTGGTGTTGGCTCTA
HKR072860 ARe82C12 pKA1U5 NM_003145.3  
GGGAAAGGCGTTTGGGATGCCAACGATGAGGCTGCTGTCATTTGTGGTGTTGGCTCTATT
HKR078521 ARe96F01 pKA1U5 NM_003145.3  
GGTCTTTGTGGCTCCGGAAAGGCGTTTGGGATGCCAACGATGAGGCTGCTGTCATTTGTG
HKR327708 RBb19E12 pKA1U5 NM_003145.3  
ATCCTGCTCTTCCTGTCTTTGTGGCTCCGGAAANGCNTTTGGGATGCCAACGATGAGGCT
HKR327722 RBb19F02 pKA1U5 NM_003145.3  
ATCCTGCTCTTCCTGTCTTTGTGGCTCCGGAAAGGCGTTTGGGATGCCAACGATGAGGCT
HKR344125 RBb60F05 pGCAP1 NM_003145.3  
HKR369375 RBd23H07 pGCAP10 NM_003145.3  
GGTGGCTCCGGAAAGGCGTTTGGGATGCCAACGATGAGGCTGCTGTCATTTGTGGTGTTG
HKR372053 RBd30C05 pGCAP10 NM_003145.3  
TGCTCTTCCTGTCTTTGTGGCTCCGGAAAGGCGTTTGGGATGCCAACGATGAGGCTGCTG
HKR453103 RBdS132M15 pGCAP10 NM_003145.3  
GGGAAAGGCGTTTGGGATGCCAACGATGAGGCTGCTGTCATTTGTGGTGTTGGCTCTATT
HKR461952 RBdS154O16 pGCAP10 NM_003145.3  
TGCCTCTTCCTGTCTTTGTGGCTCCGGAAAGGCGTTTGGGATGCCAACGATGAGGCTGCT

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl