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RIKEN DNA Bank Human Resource - SPARC

Gene ID NCBI Gene 6678 |  KEGG hsa:6678
Gene Symbol SPARC
Protein Name secreted protein acidic and cysteine rich
Synonyms BM-40|OI17|ON|ONT
Ortholog resource in our bank

External database

  KEGG gene

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX069912 IRAK174M24 pCMV-SPORT6 BC072457 NM_003118
HGY083820 IRAL009J04 pOTB7 BC004974 NM_003118 Full
HGY089366 IRAL023G22 pOTB7 BC008011 NM_003118 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR044052 ARe10C04 pKA1U5 NM_003118.2  
TGGCGACATTCCCGCGGTCCTTCAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCC
HKR045230 ARe13B06 pKA1U5 NM_003118.2  
GAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA
HKR046530 ARe16F10 pKA1U5 NM_003118.2  
GAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA
HKR057226 ARe43B02 pKA1U5 NM_003118.2  
GGTTTCCTGTTGCCTGTCTCTAAACCCCTCCACATTCCCGCGGTCCTTCAGACTGCCCGG
HKR061376 ARe53H08 pKA1U5 NM_003118.2  
GTTCCTGTTGCCTGTCTCTAAACCCCTCCACATTCCCGCGGTCCTTCAGACTGCCCGGAG
HKR062830 ARe57B06 pKA1U5 NM_003118.2  
GAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA
HKR063754 ARe59G10 pKA1U5 NM_003118.2  
GAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA
HKR064922 ARe62F02 pKA1U5 NM_003118.2  
GAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA
HKR065351 ARe63G07 pKA1U5 NM_003118.2  
ACATTCCCGCGGTCCTTCAGACTGCCCGGAGANCGNTATCTGCCTGCCGCCTGCCTGCCT
HKR070029 ARe75B05 pKA1U5 NM_003118.2  
GACACATTCCCGCGGTCCTTCAGACTGCCCGGANAGCGCGCTCTGCCTGCCGCCTGCCTG
HKR070146 ARe75G02 pKA1U5 NM_003118.2  
GAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGTCTGCCTGCCACTGAGGGTTCCCA
HKR071228 ARe78B04 pKA1U5 NM_003118.2  
GAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA
HKR164105 ARi10E09 pGCAP10 NM_003118.2  
GACACATTCCCGCGGTCCTTCAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTGCCTG
HKR179732 ARi49F12 pGCAP10 NM_003118.2  
GGTGGTTTCCTGTTGCCTGTCTCTAAACCCCTCCACATTCCCGCGGTCCTTCAGACTGCC
HKR185751 ARi64G07 pGCAP10 NM_003118.2  
CNNACTGCCCGGANAGCGCGCTCTGCCTGCCNCCTGTCTGCTGTCTCTGANNNTCCN
HKR243745 ARiS109G01 pGCAP10 NM_003118.2  
GNNACTGCCNGGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA
HKR247505 ARiS118M17 pGCAP10 NM_003118.2  
GAGACTGCCNNGAGAGCGCGCTCTGCCTGCCGCCTGCCTGCCTGCCACTGAGGGTTCCCA

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl