Prev. |  KEGG KO K11086 > 

RIKEN DNA Bank Human Resource - SNRPB

Gene ID NCBI Gene 6628 |  KEGG hsa:6628
Gene Symbol SNRPB
Protein Name small nuclear ribonucleoprotein polypeptides B and B1
Synonyms CCMS|COD|SNRPB1|Sm-B/B'|SmB/B'|SmB/SmB'|snRNP-B
Ortholog resource in our bank

  SNRPB

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY085405 IRAL013I13 pOTB7 BC003530 NM_198216 Partial
HGY103609 IRAL059A09 pOTB7 BC080516 NM_003091 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE013875 W01A034L11 pENTR-TOPO IRAL013I13 BC003530 NM_198216  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR050475 ARe26D03 pKA1U5 NM_003091.3  
GGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCA
HKR165607 ARi14A07 pGCAP10 NM_003091.3  
TGATCCTCTGTGACTGTGATGAGTTCAGAAAGATCAAGCCAAAGAACTCCAAACAAGCAG
HKR218158 ARiS045G14 pGCAP10 NM_003091.3  
TTATTTGTAACCNTTANNNNNTNNANTAAAANAGTNNACGCCTCCGANTGNGTTAATTTN
HKR321697 RBb04E01 pKA1U5 NM_003091.3  
GTCTCTCGCCAGGCGTCCTCGTGGAAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCC
HKR328059 RBb20C11 pKA1U5 NM_003091.3  
GGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCA
HKR328410 RBb21A10 pKA1U5 NM_003091.3  
GAGCGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGG
HKR328432 RBb21B08 pKA1U5 NM_003091.3  
GAGCGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGG
HKR330546 RBb26G02 pGCAP1 NM_003091.3  
GGCATTTCCGGTAGCGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGA
HKR335212 RBb38A12 pGCAP1 NM_003091.3  
AATGTGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCG
HKR339601 RBb49A01 pGCAP1 NM_003091.3  
GGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCAG
HKR347656 RBb69C08 pGCAP1 NM_003091.3  
ATTTTCCGGTAGCGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGG
HKR364150 RBd10G06 pGCAP10 NM_003091.3  
GGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCAGAGCCATCAGAA
HKR369632 RBd24B08 pGCAP10 NM_003091.3  
GGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCA
HKR384860 RBd62C12 pGCAP10 NM_003091.3  
GGANGGAGGCTCTGCCTCTGAGGAGGTGAATCCGGCCTCATCCAGATCCATGATAACCGC
HKR388881 RBd72D09 pGCAP10 NM_003091.3  
GAGCGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGG
HKR391212 RBd78A12 pGCAP10 NM_003091.3  
GGAGGAGGCGAATCCGGCGGGTATCAGAGCCATCAGAACCGCCACCATGACGGTGGGCAA
HKR396079 RBd90D07 pGCAP10 NM_003091.3  
GAGCGGTGGCGGCAACTCCGCTGTGGGAGAGAGGCTACGCCTCTGAGGAGGCGAATCCGG
HKR408823 RBdS022A23 pGCAP10 NM_003091.3  
GGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCAGAGCCATCAGAA
HKR409126 RBdS022N14 pGCAP10 NM_003091.3  
GAGCGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGG
HKR416280 RBdS040L16 pGCAP10 NM_003091.3  
CGGCCGGCCGATTTTATGATTTCCGGTAGCGGCGGCGGGAAATCGGCTGTGGGAGAGAGG
HKR420613 RBdS051I21 pGCAP10 NM_003091.3  
GGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGG
HKR420705 RBdS051M17 pGCAP10 NM_003091.3  
GGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCA
HKR432580 RBdS081H12 pGCAP10 NM_003091.3  
GGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCAGAGCCATCAGAA
HKR442170 RBdS105H02 pGCAP10 NM_003091.3  
GGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCA
HKR470839 RBdS177B15 pGCAP10 NM_003091.3  
GGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGGGTATCAGAGCCATCA
HKR470973 RBdS177H05 pGCAP10 NM_003091.3  
GGGCGGCGGGAAATCGGCTGTGGGAGAGAGGCTAGGCCTCTGAGGAGGCGAATCCGGCGG

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl