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RIKEN DNA Bank Human Resource - SLC6A8

Gene ID NCBI Gene 6535 |  KEGG hsa:6535
Gene Symbol SLC6A8
Protein Name solute carrier family 6 member 8
Synonyms CCDS1|CRT|CRTR|CT1|CTR5
Ortholog resource in our bank

  SLC6A8

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY066933 IRAK167F13 pBluescriptR BC081558 NM_005629 Full/var
HGY091834 IRAL029J18 pOTB7 BC012355 NM_005629 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE088036 M01C020B12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088084 M01C020D12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088132 M01C020F12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088180 M01C020H12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088228 M01C020J12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088276 M01C020L12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088324 M01C020N12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088372 M01C020P12 pDONR221 IMS02-H06 BC012355 NM_005629  
HGE088413 M01C021A13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE088461 M01C021C13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE088509 M01C021E13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE088557 M01C021G13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE088605 M01C021I13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE088653 M01C021K13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE088701 M01C021M13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE088749 M01C021O13 pDONR221 IMS03-A07 BC012355 NM_005629  
HGE100410 M01C051A10 pDONR221 MGC15-B05 BC012355 NM_005629  
HGE100458 M01C051C10 pDONR221 MGC15-B05 BC012355 NM_005629  
HGE100506 M01C051E10 pDONR221 MGC15-B05 BC012355 NM_005629  
HGE100554 M01C051G10 pDONR221 MGC15-B05 BC012355 NM_005629  
HGE100602 M01C051I10 pDONR221 MGC15-B05 BC012355 NM_005629  
HGE100650 M01C051K10 pDONR221 MGC15-B05 BC012355 NM_005629  
HGE100698 M01C051M10 pDONR221 MGC15-B05 BC012355 NM_005629  
HGE100746 M01C051O10 pDONR221 MGC15-B05 BC012355 NM_005629  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE041285 W01A103D13 pENTR-TOPO IRAL029J18 BC012355 NM_005629  
HGE041289 W01A103D17 pENTR-TOPO IRAL029J18 BC012355 NM_005629  
HGE041293 W01A103D21 pENTR-TOPO IRAL029J18 BC012355 NM_005629  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR182529 ARi56F09 pGCAP10 NM_005629.3  
GGAAGAGAGGGATAGTCGGAGCGAGGTGGCGAGTCGCTGAGCCCGCCGCGGCCCCGAGAG
HKR276539 ARiS191F19 pGCAP10 NM_005629.3  
AGAGAGGGATNGTCNGAGCNAGGTGGCGAGTCNCTGATCCCGCCGCGGCCCCNAGAGCGG
HKR386907 RBd67E11 pGCAP10 NM_005629.3  
GGANNNNTNNGGATAGTCGGAGCGAGGTGGCGAGTCGCTGAGCCCGCCGCGGCCCCGAGA

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl