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RIKEN DNA Bank Human Resource - SRSF3

Gene ID NCBI Gene 6428 |  KEGG hsa:6428
Gene Symbol SRSF3
Protein Name serine and arginine rich splicing factor 3
Synonyms SFRS3|SRp20
Ortholog resource in our bank

  SRSF3

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX001485 IRAK003L21 pCMV-SPORT6 BC000914 NM_003017 Full
HGY101614 IRAL054A14 pOTB7 BC069018 NM_003017 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE086002 M01C015A02 pDONR221 FLJ05-B01 BC000914 NM_003017  
HGE086050 M01C015C02 pDONR221 FLJ05-B01 BC000914 NM_003017  
HGE086098 M01C015E02 pDONR221 FLJ05-B01 BC000914 NM_003017  
HGE086146 M01C015G02 pDONR221 FLJ05-B01 BC000914 NM_003017  
HGE086194 M01C015I02 pDONR221 FLJ05-B01 BC000914 NM_003017  
HGE086242 M01C015K02 pDONR221 FLJ05-B01 BC000914 NM_003017  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE000694 W01A001M06 pENTR-TOPO IRAK003L21 BC000914 NM_003017  
HGE000696 W01A001M08 pENTR-TOPO IRAK003L21 BC000914 NM_003017  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR074412 ARe86A12 pKA1U5 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR078505 ARe96E09 pKA1U5 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR164830 ARi12B06 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR219920 ARiS049N08 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACNCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGANNAAA
HKR331327 RBb28F07 pGCAP1 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGCTTGGTGTTGGGCCGGAGGAA
HKR337347 RBb43G03 pGCAP1 NM_003017.4  
GCCGCNATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR342906 RBb57E10 pGCAP1 NM_003017.4  
GCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAG
HKR343257 RBb58C09 pGCAP1 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR346121 RBb65F01 pGCAP1 NM_003017.4  
ATTTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGCGGG
HKR348882 RBb72D10 pGCAP1 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR361372 RBd03H04 pGCAP10 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR370876 RBd27D04 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR373677 RBd34D05 pGCAP10 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR374078 RBd35D06 pGCAP10 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR383682 RBd59D10 pGCAP10 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR387226 RBd68B02 pGCAP10 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR391345 RBd78G01 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR392123 RBd80F03 pGCAP10 NM_003017.4  
GGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGC
HKR396498 RBd91E02 pGCAP10 NM_003017.4  
GCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGCGG
HKR402829 RBdS007B05 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR405908 RBdS014M20 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR406186 RBdS015H18 pGCAP10 NM_003017.4  
GATTTTTTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAG
HKR430121 RBdS075F01 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA
HKR461765 RBdS154G21 pGCAP10 NM_003017.4  
GCCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAA

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl