RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - SDCBP

Gene ID	NCBI Gene 6386 \| KEGG hsa:6386
Gene Symbol	SDCBP
Protein Name	syndecan binding protein
Synonyms	MDA-9\|MDA9\|ST1\|SYCL\|TACIP18

Ortholog resource in our bank

  SDCBP

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number	Name of Resource	Description
RDB07638	pcDNA3-hSyntenin

webcatalog20220516.tab

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE021667	W01A054C19	pENTR-TOPO	flj0075f06	AK128645	NM_005625
HGE021669	W01A054C21	pENTR-TOPO	flj0075f06	AK128645	NM_005625

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR043323	ARe08F03	pKA1U5	NM_005625.3
HKR043323	GAGTGACCGGAGGCGGCGGCGGCGAGCGGTTCCTTGTGGGCTAGAAGAATCCTGCAAAAA
HKR052829	ARe32B05	pKA1U5	NM_005625.3
HKR052829	GAGTGACCGGAGGCGGCGGCGGCGAGCGGTTCCTTGTGGGCTAGAAGAATCCTGCAAAAA
HKR062005	ARe55A05	pKA1U5	NM_005625.3
HKR062005	GAGTGACCGGAGGCGGCGGCGGCGAGCGGTTCCNTGTTGGGCTAGAAGAATCCTGCAAAA
HKR205571	ARiS013P11	pGCAP10	NM_005625.3
HKR205571	GAGTGACCGGAGGCGGCGGCGGCGAGCGGTTCCTTGTGGGCTAGAAGAATCCTGCAAAAA

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.09

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl