Prev. |  KEGG KO K00227 > 

RIKEN DNA Bank Human Resource - SC5D

Gene ID NCBI Gene 6309 |  KEGG hsa:6309
Gene Symbol SC5D
Protein Name sterol-C5-desaturase
Synonyms ERG3|S5DES|SC5DL
Ortholog resource in our bank

  SC5D

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX039430 IRAK098J14 pCMV-SPORT6 BC050427 NM_006918 Full
HGY083573 IRAL008P13 pOTB7 BC012333 NM_006918 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE018408 W01A046A08 pENTR-TOPO IRAL008P13 BC012333 NM_006918  
HGE018410 W01A046A10 pENTR-TOPO IRAL008P13 BC012333 NM_006918  
HGE018414 W01A046A14 pENTR-TOPO IRAL008P13 BC012333 NM_006918  
HGE018418 W01A046A18 pENTR-TOPO IRAL008P13 BC012333 NM_006918  
HGE018452 W01A046C04 pENTR-TOPO IRAL008P13 BC012333 NM_006918  
HGE018454 W01A046C06 pENTR-TOPO IRAL008P13 BC012333 NM_006918  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR208077 ARiS020D05 pGCAP10 NM_001024956.2  
TGAGTTTGCAGAGCAGTGGCGTGCGGAGCGGCGGCGGACCACCTCCAGGGGCTAANTGAT
HKR209202 ARiS023A02 pGCAP10 NM_001024956.2  
GGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCT
HKR209293 ARiS023D21 pGCAP10 NM_001024956.2  
GGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCT
HKR234326 ARiS085N14 pGCAP10 NM_001024956.2  
GGCTCCAGCCTCCCGGCCCGCTTGCTGGCTGCCCAGCTGCTAGGACAGTTTGCAGAGCAG
HKR243666 ARiS109C18 pGCAP10 NM_001024956.2  
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGC
HKR373629 RBd34B05 pGCAP10 NM_001024956.2  
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGC
HKR374406 RBd36A06 pGCAP10 NM_001024956.2  
GAGACAAAGGGATCTGGGCTTGAGAAAGCAAGAGCTGGGAGCTCAGCTTTGTTCCTGTTC
HKR374551 RBd36G07 pGCAP10 NM_001024956.2  
CGGCCGGCCGATGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG
HKR375627 RBd39B03 pGCAP10 NM_001024956.2  
GGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCT
HKR377326 RBd43F06 pGCAP10 NM_001024956.2  
GACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCTCCGCAAC
HKR377660 RBd44C12 pGCAP10 NM_001024956.2  
GGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCT
HKR441604 RBdS104A04 pGCAP10 NM_001024956.2  
GGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCT
HKR444188 RBdS110H20 pGCAP10 NM_001024956.2  
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl