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RIKEN DNA Bank Human Resource - POU5F1

Gene ID NCBI Gene 5460 |  KEGG hsa:5460
Gene Symbol POU5F1
Protein Name POU class 5 homeobox 1
Synonyms OCT3|OCT4|OTF-3|OTF3|OTF4|Oct-3|Oct-4|Oct3/4
Featured content Signaling pathways regulating pluripotency of stem cells (human)
Ortholog resource in our bank

  POU5F1

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB06424 pGEM3Zf_hsOct3/4isoform2 Plasmid clone of human Oct3/4 isoform 2 cDNA (NM_203289).
RDB06429 pGEM3Zf_hsOct3/4isoform1(F) Plasmid clone of human Oct3/4 isoform 1 cDNA.
RDB06434 pENTR/hOct3/4 Plasmid vector of human POU5F1
RDB06598 pCMFlag_hsOct3/4 isoform1 Expression vector of human Oct3/4 isofom 1.
RDB06603 pGEM3Zf_hsOct3/4isoform1(R) Plasmid clone of human Oct3/4 isoform 1 cDNA.
RDB06669 pCMFlag_hsOct3/4 isoform2 Expression vector of human Oct3/4 isoform 2 (NM_203289).
RDB06687 pGEM3Zf_hsOct3/4isoform2(F) Plasmid vector of human OCT3/4 cDNA isoform 2
RDB06690 pGEM3Zf_hsOct3/4isoform2(R) Plasmid vector of human OCT3/4 cDNA isoform 2
RDB06788 pCMFlag_hsOct3/4 isoform2 Expression vector of human Oct3/4 isoform 2 (NM_203289).
RDB07052 pAxEFFlag_hsOct3/4isofom1it2 Shuttle vector to generate rAd harboring human POU5F1
RDB07053 pAxEFFlag_hsOct3/4isofom2it2 Shuttle vector to generate rAd harboring human POU5F1
RDB07358 pAxEFFlag_hsOct3/4isofom2it2 Shuttle vector to generate rAd harboring human POU5F1, isoform2
RDB07361 pdxEFFlag_hsOct3/4isofom2it2 Plasmid clone of human POU5F1 cDNA
RDB07912 pGL4-phPOU5F1 Promoter collection, Human POU5F1 promoter
RDB08323 CSIV-CMV-hOct3/4-IRES2-Venus Lentivirus vector plasmid of human OCT3/4 for generating iPS cells.
RDB12896 CSII-CMV-hOct3/4-IRES2-Venus
RDB12908 CSII-EF-hOct3/4-IRES2-Venus Lentivirus vector plasmid of human OCT3/4 for generating iPS cells.
RDB12913 CS-UbC-hOct3/4-IRES2-Venus Lentivirus vector plasmid of human OCT3/4 for generating iPS cells.
RDB12914 CS-UbC-hOct3/4-IRES2-hKO1
RDB12920 CSIV-TRE-hOct3/4-CMV-KT Lentivirus vector plasmid of human OCT3/4 driven by Tet-responsive promoter and hKO1-2A-rtTA driven by CMV promoter.

webcatalog20220516.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY094898 IRAL037E02 pDNR-LIB BC020712 NM_203289 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Jun29.csv
GNP_full_IRAL_2023Jun29.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE038434 W01A096B10 pENTR-TOPO IRAL037E02 BC020712 NM_203289  
HGE038440 W01A096B16 pENTR-TOPO IRAL037E02 BC020712 NM_203289  
HGE047870 W01A119L06 pENTR-TOPO IRAL037E02 BC020712 NM_203289  
HGE047872 W01A119L08 pENTR-TOPO IRAL037E02 BC020712 NM_203289  
HGE047876 W01A119L12 pENTR-TOPO IRAL037E02 BC020712 NM_203289  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

2023.11.23

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl