DNA Bank Top |  KEGG KO K04556 > 

RIKEN DNA Bank Human Resource - PRKN

Gene ID NCBI Gene 5071 |  KEGG hsa:5071
Gene Symbol PRKN
Protein Name parkin RBR E3 ubiquitin protein ligase
Synonyms AR-JP|LPRS2|PARK2|PDJ
Featured content Parkinson disease - human
Featured content Mitophagy - human

Link

Ortholog resource in our bank

  PRKN

External database

human PRKN

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB19764 pMXs-IP-HA-Parkin Retroviral vector for stable expression of human Parkin with N-terminal HA. NM_004562.3 full cds
RDB05434 pAxCALNLhPark 2 (reverse) Shuttle vector to generate rAd harboring human Park 2 (reverse)    
RDB05433 pAxCALNLhPark 2 (forward) Shuttle vector to generate rAd harboring human Park 2 (forward)    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY013422 IRAK033J06 pBluescriptR BC022014 NM_013988 Partial/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE121225 M01C103B01 pDONR221 06_12-C01 BC022014 ENST00000366892  
HGE121273 M01C103D01 pDONR221 06_12-C01 BC022014 ENST00000366892  
HGE121321 M01C103F01 pDONR221 06_12-C01 BC022014 ENST00000366892  
HGE121369 M01C103H01 pDONR221 06_12-C01 BC022014 ENST00000366892  
HGE121417 M01C103J01 pDONR221 06_12-C01 BC022014 ENST00000366892  
HGE121465 M01C103L01 pDONR221 06_12-C01 BC022014 ENST00000366892  
HGE121513 M01C103N01 pDONR221 06_12-C01 BC022014 ENST00000366892  
HGE121561 M01C103P01 pDONR221 06_12-C01 BC022014 ENST00000366892  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2024May11.csv

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE015051 W01A037K11 pENTR-TOPO IRAK033J06 BC022014 NM_013988  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2024May11.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

2025.03.28

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl