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RIKEN DNA Bank Human Resource - MMP11

Gene ID NCBI Gene 4320 |  KEGG hsa:4320
Gene Symbol MMP11
Protein Name matrix metallopeptidase 11
Synonyms SL-3|ST3|STMY3

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Ortholog resource in our bank

  MMP11


External database

human MMP11

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB14550 MMP11-miR-139-3P del Luciferase reporter vector to test effects of miRNA influencing 3'‐untranslated region (UTR) of human MMP11 mRNA.    
RDB14549 MMP11-miR-139-3P wild Luciferase reporter vector to test effects of miRNA influencing 3'‐untranslated region (UTR) of human MMP11 mRNA.    
RDB14548 MMP11-miR-139-5P del Luciferase reporter vector to test effects of miRNA influencing 3'‐untranslated region (UTR) of human MMP11 mRNA.    
RDB14547 MMP11-miR-139-5P wild Luciferase reporter vector to test effects of miRNA influencing 3'‐untranslated region (UTR) of human MMP11 mRNA.    
RDB04629 pAxCALNLhMMP11(forward) Shuttle vector to generate rAd expressing human MMP11    
RDB04174 pAxCALNLhMMP11 (reverse) Shuttle vector to generate rAd harboring human MMP11    
RDB04159 pAxCALNLhMMP11 (reverse) Shuttle vector to generate rAd harboring human MMP11    
RDB03608 pAxCALNLhMMP11 (forward) Shuttle vector to generate rAd harboring human MMP11 (forward)    
RDB03592 pAxCALNLhMMP11 (forward) Shuttle vector to generate rAd harboring human MMP11 (forward)    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab


Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGY053427 IRAK133J11 pBluescript BC057788 NM_005940 Full/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv


NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR209306 ARiS023E10 pGCAP10 NM_005940.3  
GAGCAAGCCCAGCAGCCCCGGGGCGGATGGCTCCGGCCGCCTGGCTCCGCAGCGCGGCCG

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2024May11.csv
NRCDhumcloneList_RB_2024May11.csv


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2024.09.27

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl