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RIKEN DNA Bank Human Resource - MMP1

Gene ID NCBI Gene 4312 |  KEGG hsa:4312
Gene Symbol MMP1
Protein Name matrix metallopeptidase 1
Synonyms CLG|CLGN
Featured content SARS-CoV-2 relevant human genes

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Ortholog resource in our bank

  MMP1

External database

human MMP1

Individualy Deposited Resource

Catalog number Name of Resource Description CDS comparison
Refered (NCBI mRNA) CDS status(1)
RDB05478 pKM2L-phMMP1 Promoter Bank clone, Human collagenase-1 (MMP-1) promoter    

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX008578 IRAK021H10 pCMV-SPORT6 BC013118 NM_002421 Partial
HGY085787 IRAL014H19 pOTB7 BC013875 NM_002421 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE015252 W01A038C04 pENTR-TOPO IRAL014H19 BC013875 NM_002421  
HGE015254 W01A038C06 pENTR-TOPO IRAL014H19 BC013875 NM_002421  
HGE015256 W01A038C08 pENTR-TOPO IRAL014H19 BC013875 NM_002421  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2024May11.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

2024.09.28

Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl