RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - MBD1

Gene ID	NCBI Gene 4152 \| KEGG hsa:4152
Gene Symbol	MBD1
Protein Name	methyl-CpG binding domain protein 1
Synonyms	CXXC3\|PCM1\|RFT

Ortholog resource in our bank

  MBD1

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number	Name of Resource	Description
RDB08344	pEGFP-MBD-nls	Methylated DNA probe. Expression clone of methylated DNA binding domain (MBD) of human MBD1.

webcatalog20220516.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGY097490	IRAL043M02	pOTB7	BC033242	NM_015844	Full/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR009610	ARa24A10	pKA1U5	NM_002384.2
HKR009610	GGGAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCGGAGGAGGAGGAAGGGGAGGAGG
HKR462576	RBdS156H08	pGCAP10	NM_002384.2
HKR462576	GAGGTNNANGAGGNNCCCTCGNCNTGGGTCCACGGGCCTAGAGTGGCGGAAGATACCGGC
HKR462770	RBdS156P10	pGCAP10	NM_002384.2
HKR462770	GGCATGCGCCAGCTAGATGGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCGAAGGGGT

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.10

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl