RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - HMGN2

Gene ID	NCBI Gene 3151 \| KEGG hsa:3151
Gene Symbol	HMGN2
Protein Name	high mobility group nucleosomal binding domain 2
Synonyms	HMG17

Ortholog resource in our bank

  HMGN2

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGX053608	IRAK134A08	pCMV-SPORT6	BC061898	NM_005517	Partial
HGX053842	IRAK134K02	pCMV-SPORT6	BC064347	NM_005517	Partial
HGX066415	IRAK166A15	pCMV-SPORT6	BC071707	NM_005517	Full
HGY080462	IRAL001C14	pOTB7	BC000378	NM_005517	Full
HGY083316	IRAL008E20	pOTB7	BC003050	NM_005517	Full
HGY089169	IRAL022P09	pOTB7	BC014644	NM_005517	Full
HGY095919	IRAL039N07	pOTB7	BC032140	NM_005517	Full
HGY102851	IRAL057C03	pDNR-LIB	BC070297	NM_005517	Full
HGY103236	IRAL058B12	pOTB7	BC081567	NM_005517	Full
HGY103417	IRAL058J01	pOTB7	BC072010	NM_005517	Full
HGY103418	IRAL058J02	pOTB7	BC075837	NM_005517
HGY103584	IRAL058P24	pOTB7	BC072011	NM_005517	Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE020913	W01A052E17	pENTR-TOPO	IRAL058J02	BC075837	NM_005517
HGE020917	W01A052E21	pENTR-TOPO	IRAL058J02	BC075837	NM_005517

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR173273	ARi33D01	pGCAP10	NM_005517.3
HKR173273	GCTAACCGGTCCGGGGCTCCCAGCGCTATAAAAACTTTATAAACCCCCCGGAGCCCGAGC
HKR177655	ARi44C07	pGCAP10	NM_005517.3
HKR177655	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR180525	ARi51F05	pGCAP10	NM_005517.3
HKR180525	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR234268	ARiS085L04	pGCAP10	NM_005517.3
HKR234268	AAAAAAAACTTTATAAACCCCCCGGAGCCCGAGCAGTGTGAAGAAGAGGCGAGAACGACC
HKR247482	ARiS118L18	pGCAP10	NM_005517.3
HKR247482	GGAGCNNTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR332058	RBb30C10	pGCAP1	NM_005517.3
HKR332058	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR340574	RBb51H06	pGCAP1	NM_005517.3
HKR340574	GAGTGTGAAGAAGAGGCGAGAACGACCCCCGGAACCGACCAAAGCCCGCGCGCCGCTGCA
HKR361628	RBd04B04	pGCAP10	NM_005517.3
HKR361628	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR364974	RBd12H06	pGCAP10	NM_005517.3
HKR364974	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR365372	RBd13H04	pGCAP10	NM_005517.3
HKR365372	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR366878	RBd17D06	pGCAP10	NM_005517.3
HKR366878	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR369258	RBd23C10	pGCAP10	NM_005517.3
HKR369258	GAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTG
HKR380500	RBd51E04	pGCAP10	NM_005517.3
HKR380500	GCGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGC
HKR381260	RBd53C12	pGCAP10	NM_005517.3
HKR381260	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAANGCCCGCGCGCCGCT
HKR382498	RBd56E02	pGCAP10	NM_005517.3
HKR382498	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAANCCCGCGCGCCGCT
HKR382553	RBd56G09	pGCAP10	NM_005517.3
HKR382553	AAGGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCG
HKR382953	RBd57G09	pGCAP10	NM_005517.3
HKR382953	GGCCTGTCGCGGTGGTGCGGGCTCCGCTGCCCTCCCCGGCTGCNCTCCGGTCCAGCCCTC
HKR384500	RBd61E04	pGCAP10	NM_005517.3
HKR384500	TGGGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCG
HKR385330	RBd63F10	pGCAP10	NM_005517.3
HKR385330	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR386130	RBd65F10	pGCAP10	NM_005517.3
HKR386130	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR386427	RBd66B03	pGCAP10	NM_005517.3
HKR386427	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR392121	RBd80F01	pGCAP10	NM_005517.3
HKR392121	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR392551	RBd81G07	pGCAP10	NM_005517.3
HKR392551	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR392807	RBd82A07	pGCAP10	NM_005517.3
HKR392807	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR394547	RBd86G03	pGCAP10	NM_005517.3
HKR394547	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR395705	RBd89E09	pGCAP10	NM_005517.3
HKR395705	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR396954	RBd92G10	pGCAP10	NM_005517.3
HKR396954	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR396980	RBd92H12	pGCAP10	NM_005517.3
HKR396980	GAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTG
HKR399601	RBd99A01	pGCAP10	NM_005517.3
HKR399601	GGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCCGC
HKR399678	RBd99D06	pGCAP10	NM_005517.3
HKR399678	GNANANAGCGAGANGACCCCGGACGACCAAAGCCGCGCGCGCTGCATCCCGCGTCCAGCA
HKR405322	RBdS013F02	pGCAP10	NM_005517.3
HKR405322	GGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCCGC
HKR405417	RBdS013J01	pGCAP10	NM_005517.3
HKR405417	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR405455	RBdS013K15	pGCAP10	NM_005517.3
HKR405455	GGAGCAGTGTGAAGAANANGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR405638	RBdS014B14	pGCAP10	NM_005517.3
HKR405638	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR405691	RBdS014D19	pGCAP10	NM_005517.3
HKR405691	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR406214	RBdS015I22	pGCAP10	NM_005517.3
HKR406214	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR406271	RBdS015L07	pGCAP10	NM_005517.3
HKR406271	GGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCCGC
HKR408829	RBdS022B05	pGCAP10	NM_005517.3
HKR408829	GGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCCGC
HKR428335	RBdS070N23	pGCAP10	NM_005517.3
HKR428335	GGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCCGC
HKR430020	RBdS075A20	pGCAP10	NM_005517.3
HKR430020	TGGGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCC
HKR432402	RBdS081A02	pGCAP10	NM_005517.3
HKR432402	CGGCCGGCCGATGCTAACCGGTCCGGGGCTCCCAGCGCTATAAAAACTTTATAAACCCCC
HKR432545	RBdS081G01	pGCAP10	NM_005517.3
HKR432545	GGAGCAGTGTGAAGAANANGCGANAACGACCCCCGGACCGACCNAAGCCCGCGCGCCGTT
HKR433458	RBdS083K18	pGCAP10	NM_005517.3
HKR433458	GGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCCGC
HKR433461	RBdS083K21	pGCAP10	NM_005517.3
HKR433461	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR433518	RBdS083N06	pGCAP10	NM_005517.3
HKR433518	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR442294	RBdS105M06	pGCAP10	NM_005517.3
HKR442294	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR442346	RBdS105O10	pGCAP10	NM_005517.3
HKR442346	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR444121	RBdS110F01	pGCAP10	NM_005517.3
HKR444121	GGAGCANTGTGAAGAANAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR470871	RBdS177C23	pGCAP10	NM_005517.3
HKR470871	GGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCT
HKR471128	RBdS177N16	pGCAP10	NM_005517.3
HKR471128	TGGANCAGTGTGAANANGAGGCNAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl