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RIKEN DNA Bank Human Resource - HEXA

Gene ID NCBI Gene 3073 |  KEGG hsa:3073
Gene Symbol HEXA
Protein Name hexosaminidase subunit alpha
Synonyms TSD
Ortholog resources KEGG ortholog (KEGG orthology K12373) in the DNA Bank
Featured content Lysosome (human)
Links

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence CDS status(2)
Submitted (DDBJ)(1) Refered (NCBI mRNA)
HGY028608 IRAK071I16 pBluescriptR BC034424 NM_000520 Partial/var
HGY081456 IRAL003K16 pOTB7 BC001138 NM_000520 Partial
HGY088007 IRAL020A07 pOTB7 BC018927 NM_000520 Full
HGY089861 IRAL024K21 pOTB7 BC021030 NM_000520 Partial/var
HGY103747 IRAL059G03 pOTB7 BC084537 NM_000520 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_190322.csv
GNP_full_IRAL_190322.csv


Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number Clone name Vector Constructed from(1) Refered mRNA Status
Clone ID Sequence (DDBJ)
HGE098841 M01C047B17 pDONR221 MGC13-C09 BC018927 ENST00000268097  
HGE098889 M01C047D17 pDONR221 MGC13-C09 BC018927 ENST00000268097  
HGE098937 M01C047F17 pDONR221 MGC13-C09 BC018927 ENST00000268097  
HGE098985 M01C047H17 pDONR221 MGC13-C09 BC018927 ENST00000268097  
HGE099033 M01C047J17 pDONR221 MGC13-C09 BC018927 ENST00000268097  
HGE099081 M01C047L17 pDONR221 MGC13-C09 BC018927 ENST00000268097  
HGE099129 M01C047N17 pDONR221 MGC13-C09 BC018927 ENST00000268097  
HGE099177 M01C047P17 pDONR221 MGC13-C09 BC018927 ENST00000268097  

♦ M series clone does not contain stop codon.

GNP_entry_M01C_160109.csv

W series

Catalog number Clone name Vector Constructed from(1) Refered mRNA Status
Clone ID Sequence (DDBJ)
HGE015853 W01A039K13 pENTR-TOPO IRAL020A07 BC018927 NM_000520  

♦ W series clone contains a stop codon.

GNP_entry_W01A_160109.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.
♦ Please visit a web site of the Life Technologies for datail of the Gateway® vector system and entry clone: http://www.invitrogen.com


NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector mRNA RefSeqs/DDBJ accession(1) Status
5'-terminal sequence(2)
HKR047680 ARe19D08 pKA1U5 NM_000520.4  
GGTCTCACGTGGCCAGCCCCCTCCGAGAGGGGAGACCAGCGGGCCATGACAAGCTCCAGG
HKR048075 ARe20D03 pKA1U5 NM_000520.4  
GGGGAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGCTGCTGCTGGCGGCAG
HKR080805 ARf02A05 pKA1U5 NM_000520.4  
GGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGA
HKR166084 ARi15D12 pGCAP10 NM_000520.4  
GCTCCGAGAGGGGAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGCTGCTGC
HKR238610 ARiS096I18 pGCAP10 NM_000520.4  
GNNNAGATCANNCGGCANTGANGANNTCNNTGCTTTGGTTTTCNNTGCTGCTGGCGGCAG
HKR264622 ARiS161J06 pGCAP10 NM_000520.4  
GCTCCNANAGGGGAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGCTGCTGC
HKR364459 RBd11C11 pGCAP10 NM_000520.4  
GAGCCCCCTCCGAGAGGGGAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_160109.csv
NRCDhumcloneList_RB_160109.csv


2019.12.18

Homo_sapiens_gene_info171028.csv - RDB_hum_GIxxxxxxxxx_html_191217.pl