RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - H3-3B

Gene ID	NCBI Gene 3021 \| KEGG hsa:3021
Gene Symbol	H3-3B
Protein Name	H3.3 histone B
Synonyms	H3-3A\|H3.3B\|H3F3B

Ortholog resource in our bank

  H3-3B

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGX006148	IRAK015G04	pCMV-SPORT6	BC017558	NM_005324	Full
HGY081010	IRAL002I18	pOTB7	BC006497	NM_005324	Full
HGY081241	IRAL003B17	pOTB7	BC001124	NM_005324	Full
HGY084057	IRAL010C09	pOTB7	BC012813	NM_005324	Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE004157	W01A010G13	pENTR-TOPO	IRAK015G04	BC017558	NM_005324
HGE004209	W01A010I17	pENTR-TOPO	IRAL010C09	BC006497	NM_005324
HGE004211	W01A010I19	pENTR-TOPO	IRAL010C09	BC006497	NM_005324
HGE004213	W01A010I21	pENTR-TOPO	IRAL010C09	BC006497	NM_005324
HGE004215	W01A010I23	pENTR-TOPO	IRAL010C09	BC006497	NM_005324

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR042456	ARe06C08	pKA1U5	NM_005324.3
HKR042456	TAGTGGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGAC
HKR055231	ARe38B07	pKA1U5	NM_005324.3
HKR055231	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR056971	ARe42H03	pKA1U5	NM_005324.3
HKR056971	GGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGTTGNTTTTTCGCTCGTCGACTGCGGCTC
HKR057274	ARe43D02	pKA1U5	NM_005324.3
HKR057274	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR062552	ARe56G08	pKA1U5	NM_005324.3
HKR062552	TGGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGCNGTTGGTTTTTCGCTCGTCGACTGCGG
HKR074058	ARe85C10	pKA1U5	NM_005324.3
HKR074058	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR076008	ARe90A08	pKA1U5	NM_005324.3
HKR076008	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR079603	ARe99A03	pKA1U5	NM_005324.3
HKR079603	GGCGCANAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGATTTTTCGCTCGTCGACTGCGG
HKR079678	ARe99D06	pKA1U5	NM_005324.3
HKR079678	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGTTGGTTTTTCGCTCGTCGACTGCGG
HKR162570	ARi06H02	pGCAP10	NM_005324.3
HKR162570	GGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGTTGGTTTTTCGCTCGTCGACTGCGGCTC
HKR175702	ARi39E06	pGCAP10	NM_005324.3
HKR175702	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR180953	ARi52G09	pGCAP10	NM_005324.3
HKR180953	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR182406	ARi56A06	pGCAP10	NM_005324.3
HKR182406	TGAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCT
HKR182455	ARi56C07	pGCAP10	NM_005324.3
HKR182455	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGTTGGTTTTTCGCTCGTCGACTGCG
HKR187283	ARi68D11	pGCAP10	NM_005324.3
HKR187283	GGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGTTGGTTTTTCGCTCGTCGACTGCGGCTC
HKR205452	ARiS013K12	pGCAP10	NM_005324.3
HKR205452	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR235582	ARiS088P22	pGCAP10	NM_005324.3
HKR235582	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGTTGGTTTTTCGCTCGTCGACTGCGG
HKR243623	ARiS109A23	pGCAP10	NM_005324.3
HKR243623	GGAGCGCANAGCGGTTTGGTCGTTCGTTGGGCGGTGTTGGTTTTTCGCTCGTCGACTGCG
HKR264452	ARiS161C04	pGCAP10	NM_005324.3
HKR264452	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR322555	RBb06G11	pKA1U5	NM_005324.3
HKR322555	TGGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGNTGGTTTTTCGCTCGTCGACTGCGG
HKR325677	RBb14D05	pKA1U5	NM_005324.3
HKR325677	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR326148	RBb15G04	pKA1U5	NM_005324.3
HKR326148	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGNGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR327731	RBb19F11	pKA1U5	NM_005324.3
HKR327731	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR329674	RBb24D02	pGCAP1	NM_005324.3
HKR329674	TGGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGC
HKR329752	RBb24G08	pGCAP1	NM_005324.3
HKR329752	AGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCTTC
HKR333371	RBb33H03	pGCAP1	NM_005324.3
HKR333371	GCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCT
HKR337601	RBb44A01	pGCAP1	NM_005324.3
HKR337601	TGGCGCAGAAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR344572	RBb61H04	pGCAP1	NM_005324.3
HKR344572	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR346828	RBb67B04	pGCAP1	NM_005324.3
HKR346828	AGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR346907	RBb67E11	pGCAP1	NM_005324.3
HKR346907	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR347697	RBb69E01	pGCAP1	NM_005324.3
HKR347697	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR360905	RBd02E09	pGCAP10	NM_005324.3
HKR360905	GAGCGCACAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR362033	RBd05B09	pGCAP10	NM_005324.3
HKR362033	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR367684	RBd19D12	pGCAP10	NM_005324.3
HKR367684	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR368428	RBd21B04	pGCAP10	NM_005324.3
HKR368428	GAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCTT
HKR373307	RBd33E11	pGCAP10	NM_005324.3
HKR373307	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR373724	RBd34F04	pGCAP10	NM_005324.3
HKR373724	GGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTC
HKR380526	RBd51F06	pGCAP10	NM_005324.3
HKR380526	TGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR381205	RBd53A05	pGCAP10	NM_005324.3
HKR381205	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCNNTCGTCGACTGCGGC
HKR382900	RBd57E04	pGCAP10	NM_005324.3
HKR382900	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR383229	RBd58B05	pGCAP10	NM_005324.3
HKR383229	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCNCTCGTCGACTGCGG
HKR383253	RBd58C05	pGCAP10	NM_005324.3
HKR383253
HKR383745	RBd59G01	pGCAP10	NM_005324.3
HKR383745	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR385276	RBd63D04	pGCAP10	NM_005324.3
HKR385276	GGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTC
HKR385731	RBd64F11	pGCAP10	NM_005324.3
HKR385731	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR387653	RBd69C05	pGCAP10	NM_005324.3
HKR387653	GGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTC
HKR388126	RBd70F06	pGCAP10	NM_005324.3
HKR388126	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR390923	RBd77F03	pGCAP10	NM_005324.3
HKR390923	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR393700	RBd84E04	pGCAP10	NM_005324.3
HKR393700	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR396427	RBd91B03	pGCAP10	NM_005324.3
HKR396427	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR397204	RBd93A04	pGCAP10	NM_005324.3
HKR397204	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR420551	RBdS051G07	pGCAP10	NM_005324.3
HKR420551	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR420638	RBdS051J22	pGCAP10	NM_005324.3
HKR420638	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR428337	RBdS070O01	pGCAP10	NM_005324.3
HKR428337	GAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCTT
HKR433331	RBdS083F11	pGCAP10	NM_005324.3
HKR433331	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR441704	RBdS104E08	pGCAP10	NM_005324.3
HKR441704	TGNAGNNNANAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCNACTGC
HKR444134	RBdS110F14	pGCAP10	NM_005324.3
HKR444134	GGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTC
HKR461685	RBdS154D13	pGCAP10	NM_005324.3
HKR461685	GGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGC
HKR461896	RBdS154M08	pGCAP10	NM_005324.3
HKR461896	GAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGG
HKR462548	RBdS156G04	pGCAP10	NM_005324.3
HKR462548	GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCG
HKR470919	RBdS177E23	pGCAP10	NM_005324.3
HKR470919	GAGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCTT
HKR475118	RBdS187N06	pGCAP10	NM_005324.3
HKR475118	AGAGCGGTTTGGTCGTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCTTC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

♦ No Approval Forms Required for Fluorescent Protein Genes Developed by Dr. Atsushi Miyawaki
♦ RIKEN BRC will be closed from December 28, 2024 through January 5, 2025 due to New Year's holidays.
♦ A bicistronic cell cycle reporter, Fucci2a (Sep 17, 2024)
♦ Monomeric Fluorescent Protein Resource, mStayGold (Dec 18, 2023)
♦ Visualization of Organelles update (Dec 18, 2023)
♦ Development of two mouse strains conditionally expressing bright luciferases (Sep 08, 2023)
♦ Autophagy and Mitophagy Updates (Aug 16, 2023)
♦ High intensity forms of luciferase and luminescent proteins from various organisms (BRC RESOURCE NEWS) (Apr 28, 2023)
♦ Plasmid of Cas9 expression/mRNA production, evaluation of the genome edit efficiency, and Knock-in donors and tags
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RIKEN BRC 20th

2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl