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RIKEN DNA Bank Human Resource - XRCC6

Gene ID NCBI Gene 2547 |  KEGG hsa:2547
Gene Symbol XRCC6
Protein Name X-ray repair cross complementing 6
Synonyms CTC75|CTCBF|G22P1|KU70|ML8|TLAA
Ortholog resource in our bank

  XRCC6

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene


Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence submitted (DDBJ)(1) CDS comparison
Refered (NCBI mRNA) CDS status(2)
HGX007945 IRAK019O09 pCMV-SPORT6 BC018259 NM_001469 Full
HGX069856 IRAK174K16 pCMV-SPORT6 BC072449 NM_001469 Full
HGY089324 IRAL023F04 pOTB7 BC008343 NM_001469 Full
HGY090899 IRAL027E03 pOTB7 BC010034 NM_001469 Full
HGY091744 IRAL029F24 pOTB7 BC012154 NM_001469 Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv


Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number Clone name Vector Constructed from(1) CDS comparison Status
Clone ID Sequence (DDBJ) Refered mRNA CDS status
HGE002722 W01A006N10 pENTR-TOPO IRAL023F04 BC008343 NM_001469  
HGE002730 W01A006N18 pENTR-TOPO IRAL029F24 BC012154 NM_001469  
HGE002732 W01A006N20 pENTR-TOPO IRAL029F24 BC012154 NM_001469  
HGE002734 W01A006N22 pENTR-TOPO IRAL029F24 BC012154 NM_001469  

♦ W series clone contains a stop codon.

GNP_entry_W01A_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.


NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector CDS comparison Status
Refered mRNA(1) CDS status
5'-terminal sequence(2)
HKR045298 ARe13E02 pKA1U5 NM_001469.3  
GGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAG
HKR047353 ARe18G09 pKA1U5 NM_001469.3  
GGCATGCGTGGATTGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCA
HKR055778 ARe39H10 pKA1U5 NM_001469.3  
GGTCTTCTGTCCAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAGG
HKR078501 ARe96E05 pKA1U5 NM_001469.3  
GGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAG
HKR170006 ARi25A06 pGCAP10 NM_001469.3  
GGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAGGGTGGGAGTCATATTA
HKR205463 ARiS013K23 pGCAP10 NM_001469.3  
GGGATTGTCGTCTTCTGNCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAA
HKR264466 ARiS161C18 pGCAP10 NM_001469.3  
GGATTGTNNTCTTCTGTCCNNGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAAC
HKR321609 RBb04A09 pKA1U5 NM_001469.3  
GGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAGGGTGGGA
HKR324036 RBb10B12 pKA1U5 NM_001469.3  
GCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTTAGCCAACATGTCAGGGTGGGAG
HKR324051 RBb10C03 pKA1U5 NM_001469.3  
GGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGT
HKR329280 RBb23D08 pGCAP1 NM_001469.3  
GGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAGGGNTGGGAGTCATATTA
HKR331771 RBb29H03 pGCAP1 NM_001469.3  
GGCATGCGTGGATTGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCA
HKR337683 RBb44D11 pGCAP1 NM_001469.3  
GATGCGTGGATTGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGT
HKR348580 RBb71H12 pGCAP1 NM_001469.3  
GGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAG
HKR365769 RBd14H01 pGCAP10 NM_001469.3  
GAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAGGGTGGGAGTCA
HKR366155 RBd15G11 pGCAP10 NM_001469.3  
GTTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAGGG
HKR369775 RBd24H07 pGCAP10 NM_001469.3  
GGATTGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAAC
HKR376551 RBd41G07 pGCAP10 NM_001469.3  
GGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAG
HKR377605 RBd44A05 pGCAP10 NM_001469.3  
GGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAG
HKR378059 RBd45C11 pGCAP10 NM_001469.3  
TGGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAGGGTGGGAGTCAT
HKR397732 RBd94F12 pGCAP10 NM_001469.3  
CGACCGGCCGATGCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAAC
HKR398106 RBd95E10 pGCAP10 NM_001469.3  
GGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAG
HKR402907 RBdS007E11 pGCAP10 NM_001469.3  
GGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTCAG
HKR402910 RBdS007E14 pGCAP10 NM_001469.3  
GGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGT
HKR405321 RBdS013F01 pGCAP10 NM_001469.3  
GATGCGTGGATTGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGT
HKR433513 RBdS083N01 pGCAP10 NM_001469.3  
GATGCGTGGATTGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGT
HKR461766 RBdS154G22 pGCAP10 NM_001469.3  
GTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGTAGCCAACATGTC
HKR474834 RBdS187B10 pGCAP10 NM_001469.3  
GATGCGTGGATTGTCGTCTTCTGTCCAAGTTGGTCGCTTCCCTGCGCCAAAGTGAGCAGT

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv


2023.05.07

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl