RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - ATP5F1B

Gene ID	NCBI Gene 506 \| KEGG hsa:506
Gene Symbol	ATP5F1B
Protein Name	ATP synthase F1 subunit beta
Synonyms	ATP5B\|ATPMB\|ATPSB\|HEL-S-271
Featured content	Parkinson disease - human
Featured content	Huntington disease - human
Featured content	Alzheimer disease - human

Ortholog resource in our bank

  ATP5F1B

External database

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGX001257	IRAK003C09	pCMV-SPORT6	BC016512	NM_001686	Full

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the clone sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2023Apr24.csv
GNP_full_IRAL_2023Apr24.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

M series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE091613	M01C029A13	pDONR221	MGC04-A07	BC016512	NM_001686
HGE091661	M01C029C13	pDONR221	MGC04-A07	BC016512	NM_001686
HGE091709	M01C029E13	pDONR221	MGC04-A07	BC016512	NM_001686
HGE091757	M01C029G13	pDONR221	MGC04-A07	BC016512	NM_001686
HGE091805	M01C029I13	pDONR221	MGC04-A07	BC016512	NM_001686
HGE091853	M01C029K13	pDONR221	MGC04-A07	BC016512	NM_001686
HGE091901	M01C029M13	pDONR221	MGC04-A07	BC016512	NM_001686
HGE091949	M01C029O13	pDONR221	MGC04-A07	BC016512	NM_001686

♦ M series clone does not contain stop codon.

GNP_entry_M01C_2023Apr24.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

NRCD Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	CDS comparison
	Clone name	Vector	Refered mRNA⁽¹⁾	CDS status
	5'-terminal sequence⁽²⁾
HKR050460	ARe26C12	pKA1U5	NM_001686.3
HKR050460	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR051348	ARe28G04	pKA1U5	NM_001686.3
HKR051348	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR054404	ARe36A04	pKA1U5	NM_001686.3
HKR054404	GAGTCTCCACCCGGACTACGCCATGATTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGG
HKR076812	ARe92A12	pKA1U5	NM_001686.3
HKR076812	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR219730	ARiS049F10	pGCAP10	NM_001686.3
HKR219730	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTNCTNCNNN
HKR222295	ARiS055M07	pGCAP10	NM_001686.3
HKR222295	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGNNGCTGCTCNNNN
HKR321260	RBb03C12	pKA1U5	NM_001686.3
HKR321260	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR326829	RBb17B05	pKA1U5	NM_001686.3
HKR326829	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR326978	RBb17H10	pKA1U5	NM_001686.3
HKR326978	GAGCCTTCAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTG
HKR328149	RBb20G05	pKA1U5	NM_001686.3
HKR328149	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR331656	RBb29C08	pGCAP1	NM_001686.3
HKR331656	GGCTGCAGCCTTCAGTCTCCACCCGGACTACGCCATGNTTGGGGTTTGTGGGTCGGGTGG
HKR333750	RBb34G06	pGCAP1	NM_001686.3
HKR333750	GAGTCTCCACCCGGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGG
HKR337353	RBb43G09	pGCAP1	NM_001686.3
HKR337353	TTGAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCG
HKR338523	RBb46F03	pGCAP1	NM_001686.3
HKR338523	TTGAGTCTCCACCCGGACTACGCCATGNTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCC
HKR338580	RBb46H12	pGCAP1	NM_001686.3
HKR338580	TGAGTCTCCACCCGGACTACGCCATGTTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCG
HKR344908	RBb62E12	pGCAP1	NM_001686.3
HKR344908
HKR346034	RBb65B10	pGCAP1	NM_001686.3
HKR346034	TTGAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCG
HKR364170	RBd10H02	pGCAP10	NM_001686.3
HKR364170	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR364802	RBd12A02	pGCAP10	NM_001686.3
HKR364802	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR364926	RBd12F06	pGCAP10	NM_001686.3
HKR364926	GGCCTTCAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGC
HKR367255	RBd18C07	pGCAP10	NM_001686.3
HKR367255	ATCGTGGCGGTCATTGGCGCAGTGGTGGACGTCCAGTTTGATGAGGGACTACCACCAATT
HKR374180	RBd35H12	pGCAP10	NM_001686.3
HKR374180	GACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGCCTCCGGGGCCTTGCGG
HKR380832	RBd52B08	pGCAP10	NM_001686.3
HKR380832	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR381650	RBd54C02	pGCAP10	NM_001686.3
HKR381650	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR382474	RBd56D02	pGCAP10	NM_001686.3
HKR382474	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCNNNTNNNCGCTGCTCCGGC
HKR391607	RBd79A07	pGCAP10	NM_001686.3
HKR391607	GGCCTTCAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGC
HKR392580	RBd81H12	pGCAP10	NM_001686.3
HKR392580	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR394828	RBd87B04	pGCAP10	NM_001686.3
HKR394828	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR396027	RBd90B03	pGCAP10	NM_001686.3
HKR396027	GCCTTCAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCT
HKR428319	RBdS070N07	pGCAP10	NM_001686.3
HKR428319	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGNCGCNGCTCCNGC
HKR430318	RBdS075N06	pGCAP10	NM_001686.3
HKR430318	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR433257	RBdS083C09	pGCAP10	NM_001686.3
HKR433257	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR441654	RBdS104C06	pGCAP10	NM_001686.3
HKR441654	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR462473	RBdS156D01	pGCAP10	NM_001686.3
HKR462473	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR471135	RBdS177N23	pGCAP10	NM_001686.3
HKR471135	GAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCGGC
HKR471160	RBdS177O24	pGCAP10	NM_001686.3
HKR471160	TGGAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGCCGCTGCTCCG
HKR475116	RBdS187N04	pGCAP10	NM_001686.3
HKR475116	CGGCCGGCCGATGAGTCTCCACCCGGACTACGCCATGTTGGGGTTTGTGGGTCGGGTGGC

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
♦ These clones have very long transcript since they were constructed by the method "Vector Capping."
(1) Refference sequence either NCBI mRNA or DDBJ DNA identified by the 5' terminal sequence.
(2) 5' terminal sequence of the insert provided from the depositor.

NRCDhumcloneList_AR_2023May03.csv
NRCDhumcloneList_RB_2023May03.csv

2023.05.06

Homo_sapiens_gene_info200108.csv - RDB_hum_GIxxxxxxxxx_html_230504.pl