RIKEN DNA Bank Human Resource

RIKEN DNA Bank Human Resource - ATM

Gene ID	NCBI Gene 472 \| KEGG hsa:472
Gene Symbol	ATM
Protein Name	ATM serine/threonine kinase
Synonyms	AT1\|ATA\|ATC\|ATD\|ATDC\|ATE\|TEL1\|TELO1
Featured content	Rb pathway
Featured content	NF-kappa B signaling pathway (human)
Featured content	Apoptosis - human

Link

Ortholog resource in our bank

ATM

External database

human ATM

Individualy Deposited Resource

Catalog number	Name of Resource	Description	CDS comparison
Catalog number	Name of Resource	Description	Refered (NCBI mRNA)	CDS status⁽¹⁾
RDB15816	pX330-U6-Chimeric_BB-CBh-hSpCas9 sgRNA ATM exon11	Expression vector of sgRNA for targeting human ATM exon11 and human codon-optimized SpCsa9.

(1) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.

webcatalog20240727.tab

Genome Network Project (GNP) Human cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	CDS comparison
Catalog number	Clone name	Vector	Sequence submitted (DDBJ)⁽¹⁾	Refered (NCBI mRNA)	CDS status⁽²⁾
HGX056527	IRAK141F07	pCMV-SPORT6	BC061584	NM_000051	Partial
HGY086606	IRAL016I14	pDNR-LIB	BC007023	NM_138292	Partial/var

(1) Actual nucleotide sequence of this clone submitted to the DNA Data Bank of Japan (DDBJ)/EMBL/Genbank.
(2) CDS status was determined by comparing the plasmid sequence with NCBI RefSeq mRNA.
♦ Full, whole CDS.
♦ Full/var, whole CDS though with ins/dels or substitution.
♦ Partial, partial CDS
♦ Partial/var, partial CDS though with ins/dels or substitution.

GNP_full_IRAK_2024May11.csv
GNP_full_IRAL_2024May11.csv

Genome Network Project (GNP) Gateway® Entry Clone

Plasmid request [in Japanese] [in English]

W series

Catalog number	Clone name	Vector	Constructed from⁽¹⁾		CDS comparison		Status
Catalog number	Clone name	Vector	Clone ID	Sequence (DDBJ)	Refered mRNA	CDS status	Status
HGE038564	W01A096G20	pENTR-TOPO	IRAK141F07	BC061584	NM_000051
HGE047580	W01A118P20	pENTR-TOPO	IRAK141F07	BC061584	NM_000051
HGE047582	W01A118P22	pENTR-TOPO	IRAK141F07	BC061584	NM_000051

♦ W series clone contains a stop codon.

GNP_entry_W01A_2024May11.csv

♦ Full length sequence is not available. ORF information might be updated by now and thus actual insert could differ from the latest version.
♦ GNP Gateway® entry clone was constructed from the open reading frame (ORF) amplified by PCR.
(1) ID and associated information of the cDNA clone used as a template of PCR.

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Homo_sapiens_gene_info230514.csv - RDB_hum_GIxxxxxxxxx_html_240727.pl