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pSFL68 pRS314-GPDp-Erg6-V5-GFP11

The split-GFP system clone for visualizing organelle contact sites in S. cerevisiae. probe: V5-GFP11; location: lipid droplets.

Catalog number RDB18574
Resource name pSFL68 pRS314-GPDp-Erg6-V5-GFP11
Alternative name pSFL68, pRS314-GPDp-Erg6-V5-GFP11
Clone info. The split-GFP system clone for visualizing organelle contact sites in vivo. Expression vector of S. cerevisiae sterol 24-C-methyltransferase (Erg6) fused with V5-GFP11 at C-terminus, GPD promoter, CYC1 terminator, please refer to Fig.1 and Table S1 of Kakimoto, Y. et al. Sci. Rep., 8 (1): 6175, 2018.
Comment Expression was confirmed by the depositor with fluorescence microscopy.
Vector backbone pRS314 (plasmid)
Selectable markers Ampicillin (E. coli), TRP1 (S. cerevisiae).
Gene/insert name S. cerevisiae ERG6 cDNA Aequorea victoria GFP cDNA
Depositor|Developer Tamura, Yasushi |
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External Database
S. cerevisiae ERG6 Aequorea victoria GFP

          Reference sequence
            
           

          Distribution information

          Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
          Terms and conditions for distribution In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature designated by the DEPOSITOR is requested. (Kakimoto, Y. et al. Sci. Rep. 8:6175, 2018)
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          提供条件 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する(Kakimoto, Y. et al. Sci. Rep. 8:6175, 2018)。
          提供依頼 手続きの詳細は、「提供申込みについて[link]」をご覧ください。営利目的利用についてはお問い合わせください。
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          RDB18574 pSFL68 pRS314-GPDp-Erg6-V5-GFP11 DNA solution

          Please review the QC test results indicated by check icon below as well as clone information before placing your order.

          How to cite this biological resource

          Materials & Methods section:

          The pSFL68 pRS314-GPDp-Erg6-V5-GFP11 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB18574).

          Reference section:

          Kakimoto, Y., Tashiro, S., Kojima, R., Morozumi, Y., Endo, T., Tamura, Y., Visualizing multiple inter-organelle contact sites using the organelle-targeted split-GFP system. Sci. Rep. 8 (1): 6175 (2018). PMID 29670150.

          Further references such as user reports and related articles (go to bottom)


          References and tips

          Featured content

          Featured content Visualizing multiple inter-organelle contact sites (English text)

          QC test results

          RIKEN BRC has sequenced portions of this material for quality test.
          Please review the QC test results indicated by check icon as well as clone information before placing your order.

          Test sheet RDB18574_B0J5p1-1.pdf check

          Nucleotide sequence of a portion of this resource (if available).

          Primer: HB-NOS_R (Pr0800)
          Region: T7 pro, insert 5' (GPD pro)
          Sequence file: RDB18574_B0J5a.seq check
          >D07393A8_B0J5_3_HB-NOS_R_A03_03_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNGNAACGCC NGGGTTTTCC CAGTCACGAC
             61 GTTGTAAAAC GACGGCCAGT GAATTGTAAT ACGACTCACT ATAGGGCGAA TTGGAGCTCA
            121 GTTTATCATT ATCAATACTC GCCATTTCAA AGAATACGTA AATAATTAAT AGTAGTGATT
            181 TTCCTAACTT TATTTAGTCA AAAAATTAGC CTTTTAATTC TGCTGTAACC CGTACATGCC
            241 CAAAATAGGG GGCGGGTTAC ACAGAATATA TAACATCGTA GGTGTCTGGG TGAACAGTTT
            301 ATTCCTGGCA TCCACTAAAT ATAATGGAGC CCGCTTTTTA AGCTGGCATC CAGAAAAAAA
            361 AAGAATCCCA GCACCAAAAT ATTGTTTTCT TCACCAACCA TCAGTTCATA GGTCCATTCT
            421 CTTAGCGCAA CTACAGAGAA CAGGGGCACA AACAGGCAAA AAACGGGCAC AACCTCAATG
            481 GAGTGATGCA ACCTGCCTGG AGTAAATGAT GACACAAGGC AATTGACCCA CGCATGTATC
            541 TATCTCATTT TCTTACACCT TCTATTACCT TCTGCTCTCT CTGATTTGGA AAAAGCTGAA
            601 AAAAAAGGTT GAAACCAGTT CCCTGAAATT ATTCCCCTAC TTGACTAATA AGTATATAAA
            661 GACGGTAGGT ATTGATTGTA ATTCTGTAAA TCTATTTCTT AAACTTCTTA AATTCTACTT
            721 TTATAGTTAG TCTTTTTTTT AGTTTTAAAA CACCAGAACT TAGTTTCGAC NGANGCGGCC
            781 GCNTGANTGA AACAGAATTG AGAAAAAGAC AGGNCCNATT CACTANGGAG TTACATGGTG
            841 ATGATATTGG TAAAAAGANN GGNTTGANNG CATTGATGTC GAANNAACAA CTCTGCNCNA
            901 ANNNNANCCG TNNNNAANTA CTTGANAAAT TGGGNNGGNA GAANCGATNA ANANGCCNNA
            961 NAANNNCNTC NTGNNNNANT ATANNGNNNN CNCNCNNTNC CTACNNNNAN NNNNTTNNNN
          1021 ANNNNNNNNN N
          //
          Primer: SV40pA3'Element Reverse (Pr0108)
          Region: T3 pro, insert 3' (CYC1 ter, V5-GFP11 3')
          Sequence file: RDB18574_B0J5b.seq check
          >D07393A8_B0J5_3_SV40A3'ElementReverse_B03_06_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNGN NNAANNCNNG CAACGCGGCC TTTTTACGGT
             61 TCCTGGCCTT TTGCTGGCCT TTTGCTCACA TGTTCTTTCC TGCGTTATCC CCTGATTCTG
            121 TGGATAACCG TATTACCGCC TTTGAGTGAG CTGATACCGC TCGCCGCAGC CGAACGACCG
            181 AGCGCAGCGA GTCAGTGAGC GAGGAAGCGG AAGAGCGCCC AATACGCAAA CCGCCTCTCC
            241 CCGCGCGTTG GCCGATTCAT TAATGCAGCT GGCACGACAG GTTTCCCGAC TGGAAAGCGG
            301 GCAGTGAGCG CAACGCAATT AATGTGAGTT AGCTCACTCA TTAGGCACCC CAGGCTTTAC
            361 ACTTTATGCT TCCGGCTCGT ATGTTGTGTG GAATTGTGAG CGGATAACAA TTTCACACAG
            421 GAAACAGCTA TGACCATGAT TACGCCAAGC TCGAAATTAA CCCTCACTAA AGGGAACAAA
            481 AGCTGGTACC GGCCGCAAAT TAAAGCCTTC GAGCGTCCCA AAACCTTCTC AAGCAAGGTT
            541 TTCAGTATAA TGTTACATGC GTACACGCGT CTGTACAGAA AAAAAAGAAA AATTTGAAAT
            601 ATAAATAACG TTCTTAATAC TAACATAACT ATAAAAAAAT AAATAGGGAC CTAGACTTCA
            661 GGTTGTCTAA CTCCTTCCTT TTCGGTTAGA GCGGATGTGG GGGGAGGGCG TGAATGTAAG
            721 CGTGACATAA CTAATTACAT GACTCGAGGT CGACGGTATC GATAAGCTTG ATATCGAATT
            781 CTTANGTAAT GCCTGCAGCA TTGACATATT CGTGTAGAAN CATATGATCT CTGCTTGTGG
            841 AACCNCCACC ACTTCCNCCA GTTGAGTCTA AGCCCNAAAN ANGGTTNNGT ATGGGTTTCC
            901 CANAANCCTC CGGCNNANGN NCCTNGANTT GCTNNTTGGG AANTTTGGGA NGGGGNTNCG
            961 GNGTTTTCTG GNNTNNNNAN CNNNNAAAAG CATCATNNGN NNNGNNNNAN NTTNGNNNNN
          1021 NNNNN
          //
          Primer: TRP1pro_F (Pr0171)
          Region: TRP1
          Sequence file: RDB18574_B0J5c.seq check
          >D07393A8_B0J5_3_TRP1pro_F_C03_09_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNAGGCAGCT TGGANTANGT CTGTTATTAA TTTCNCAGGT
             61 AGTTCTGGTC CNTTGGTGAA AGTTTGCGGC TTGCAGAGCA CAGAGGCCGC AGAATGTGCT
            121 CTAGATTCCG ATGCTGACTT GCTGGGTATT ATATGTGTGC CCAATAGAAA GAGAACAATT
            181 GACCCGGTTA TTGCAAGGAA AATTTCAAGT CTTGTAAAAG CATATAAAAA TAGTTCAGGC
            241 ACTCCGAAAT ACTTGGTTGG CGTGTTTCGT AATCAACCTA AGGAGGATGT TTTGGCTCTG
            301 GTCAATGATT ACGGCATTGA TATCGTCCAA CTGCATGGAG ATGAGTCGTG GCAAGAATAC
            361 CAAGAGTTCC TCGGTTTGCC AGTTATTAAA AGACTCGTAT TTCCAAAAGA CTGCAACATA
            421 CTACTCAGTG CAGCTTCACA GAAACCTCAT TCGTTTATTC CCTTGTTTGA TTCAGAAGCA
            481 GGTGGGACAG GTGAACTTTT GGATTGGAAC TCGATTTCTG ACTGGGTTGG AAGGCAAGAG
            541 AGCCCCGAAA GCTTACATTT TATGTTAGCT GGTGGACTGA CGCCAGAAAA TGTTGGTGAT
            601 GCGCTTAGAT TAAATGGCGT TATTGGTGTT GATGTAAGCG GAGGTGTGGA GACAAATGGT
            661 GTAAAAGACT CTAACAAAAT AGCAAATTTC GTCAAAAATG CTAAGAAATA GGTTATTACT
            721 GAGTAGTATT TATTTAAGTA TTGTTTGTGC ACTTGCCGAT CTATGCGGTG TGAAATACCG
            781 CACAGATGCG TAAGGAGAAA ATACCGCATC ANGAAATTGT AAGCGTTAAT ATTTTGTTAA
            841 AATTCGCGTT AAATTTTTGT NNAATCAGCT CATTTTTTAA CCAATANGCC GAAATCGGCA
            901 AAATCCCTTA TAAATCNAAA GAATANANCG ANATAGGGTT GANTGNTGNT CCNGTTTGGN
            961 ANNAGAGTNN NCTATTAAAG AACGNGNNNN NNNNCNNNNA NNNNNAAAAA NCGNCTATCN
          1021 NNNNNNNGNN NNNNNNNN
          //
          Primer: CYC1ter_R (Pr0022)
          Region: insert mid (CYC1 ter, V5-GFP11, Erg6 3')
          Sequence file: RDB18574_B0J5d.seq check
          >D07393A8_B0J5_3_CYC1ter_R_F03_18_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN GCGGNNGNGG GGGGAGGGCG TGAATGTAAG CGTGACATAA
             61 CTAATTACAT GACTCGAGGT CGACGGTATC GATAAGCTTG ATATCGAATT CTTAGGTAAT
            121 GCCTGCAGCA TTGACATATT CGTGTAGAAC CATATGATCT CTGCTTGTGG AACCACCACC
            181 ACTTCCACCA GTTGAGTCTA AGCCCAAAAG AGGGTTTGGT ATGGGTTTCC CAGAACCTCC
            241 GGCAGAGGAT CCTTGAGTTG CTTCTTGGGA AGTTTGGGAG GGGGTTTCGG CGTTTTCTGG
            301 CTTCCTAGCG ACGAAAAGCA TCATTGGAGT GAATAACTTG GACTTACCAC CGGCAACTAA
            361 ACCAACCGCA GCATTTTCTA GAGCAGCAGT AACTTCCTTG GAACCTTCTG GGGCTAGACC
            421 TAATTTTTCC ATTACAGTAA CCATTGCTGT AGTAAATTGT CTACCCAAGT AAGAAGTTCT
            481 GAAAAATGTG GCCAAATTAG CTAAGTTTTG AACGTACTTC CACTCACCAG TTAATGGGTA
            541 ATACCAAGGG ATTTCATCAT CATTGTCCGC CAGGTCTTCG CTAACGAGGA CTTCGAAACC
            601 ACAGTTCTTC AATGCTTTCC TAGCCACGTC GACATGGAAC ATCTTTGGGA TACCATCACC
            661 TAGTTCAATT TCATAAGCGA TCTTTCTATG TTCAGGATTG TTTTCGTCAT ATTTATCAGT
            721 CATTACCCAT TCGTAAACAG CAAAGGTANC ACCCGGTTTC AAAACCTTGT AGATTTCGCT
            781 GTATACACCT TCTAATTTTG GAGCGTGACA TGTGGCCTCA ATTGCATAAA CTTTGTCNAA
            841 AGTGTTTTCT TCGAAATCCA TTTTCNTGAA ATCACCCTTT ACAAAGTCCA TTTGGTCANT
            901 CAAATTGTAT TTTTTTANCG NAATATTTTG NCNNNNCAAT TTGGNAATCG TTATTGNTTA
            961 NACNNATGAN GTTNCANNCN GNNAATNNNG NNNTCTNNNT NGNTGGGNCC NNNNCACNNN
          1021 NNNNNNN
          //
          Primer: TDH3pro_F (Pr0431)
          Region: insert mid (GPD pro, Erg6 5')
          Sequence file: RDB18574_B0J5e.seq check
          >D07393A8_B0J5_3_TDH3pro_F_D03_12_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NTGNNNTTCN GNAAATCTAT TTCTTAAACT TCTTAAATTC
             61 TACTTTTATA GTTAGTCTNT NNTTTAGTTT TAAAACACCA GAACTTAGTT TCGACGGATG
            121 CGGCCGCATG AGTGAAACAG AATTGAGAAA AAGACAGGCC CAATTCACTA GGGAGTTACA
            181 TGGTGATGAT ATTGGTAAAA AGACAGGTTT GAGTGCATTG ATGTCGAAGA ACAACTCTGC
            241 CCAAAAGGAA GCCGTTCAGA AGTACTTGAG AAATTGGGAT GGTAGAACCG ATAAAGATGC
            301 CGAAGAACGT CGTCTTGAGG ATTATAATGA AGCCACACAT TCCTACTATA ACGTCGTTAC
            361 AGATTTCTAT GAATATGGTT GGGGTTCCTC TTTCCATTTC AGCAGATTTT ATAAAGGTGA
            421 GAGTTTCGCT GCCTCGATAG CAAGACATGA ACATTATTTA GCTTACAAGG CTGGTATTCA
            481 AAGAGGCGAT TTAGTTCTCG ACGTTGGTTG TGGTGTTGGG GGCCCAGCAA GAGAGATTGC
            541 AAGATTTACC GGTTGTAACG TCATCGGTCT AAACAATAAC GATTACCAAA TTGCCAAGGC
            601 AAAATATTAC GCTAAAAAAT ACAATTTGAG TGACCAAATG GACTTTGTAA AGGGTGATTT
            661 CATGAAAATG GATTTCGAAG AAAACACTTT CGACAAAGTT TATGCAATTG AGGCCACATG
            721 TCACGCTCCA AAATTAGAAG GTGTATACAG CGAAATCTAC AAGGTTTTGA AACCGGGNGG
            781 TACCTTTGCT GTTTACGANT GGGTAATGAC TGATAAATAT GACGAAAACA ATCCTGAACA
            841 TAGAAAGATC GCTTATGAAA TTGANCTANG TGANGGTATC CCNAAGANGT TNCANGTCNA
            901 CGNGGCTAGG AAAGCATTGA AGAANTGTGN TTTCNAAGTC CTCGTTAGCG ANNNNNNNNN
          961 N
          //
          Primer: Amp_R (Pr0008)
          Region: AmpR pro, CEN_ARS
          Sequence file: RDB18574_B0J5f.seq check
          >D07393A8_B0J5_3_Amp_R_E03_15_ABI24.ab1
              1 NNNNNNNNNN NNNNNNNNNN NNATTTATCN GGGTTATTGT CTCATGAGCG GATACATATT
             61 TGAATGTATT TAGAAAAATA AACAAATAGG GGTTCCGCGC ACATTTCCCC GAAAAGTGCC
            121 ACCTGGGTCC TTTTCATCAC GTGCTATAAA AATAATTATA ATTTAAATTT TTTAATATAA
            181 ATATATAAAT TAAAAATAGA AAGTAAAAAA AGAAATTAAA GAAAAAATAG TTTTTGTTTT
            241 CCGAAGATGT AAAAGACTCT AGGGGGATCG CCAACAAATA CTACCTTTTA TCTTGCTCTT
            301 CCTGCTCTCA GGTATTAATG CCGAATTGTT TCATCTTGTC TGTGTAGAAG ACCACACACG
            361 AAAATCCTGT GATTTTACAT TTTACTTATC GTTAATCGAA TGTATATCTA TTTAATCTGC
            421 TTTTCTTGTC TAATAAATAT ATATGTAAAG TACGCTTTTT GTTGAAATTT TTTAAACCTT
            481 TGTTTATTTT TTTTTCTTCA TTCCGTAACT CTTCTACCTT CTTTATTTAC TTTCTAAAAT
            541 CCAAATACAA AACATAAAAA TAAATAAACA CAGAGTAAAT TCCCAAATTA TTCCATCATT
            601 AAAAGATACG AGGCGCGTGT AAGTTACAGG CAAGCGATCC GTCTAAGAAA CCATTATTAT
            661 CATGACATTA ACCTATAAAA ATAGGCGTAT CACGAGGCCC TTTCGTCTCG CGCGTTTCGG
            721 TGATGACGGT GAAAACCTCT GACACATGCA GCTCCCGGAG ACGGTCACAG CTTGTCTGTA
            781 AGCGGATGCC GGGAGCAGAC AAGCCCGTCA GGGCGCGTCA GCGGGTGTTG GCGGGTGTCG
            841 GGGCTGGCTT AACTATGCGG CATCNNANCA GANTGNACTG AGANNGNNCC NTANATCACG
            901 ANATTACTAT ATATATAATA TAGGAAGCAT TTAATANAAN NGCATCGTAA TATATGTGTA
            961 CTTTGCAGTT ATGANNNNNN ANGNNANNAN NGNNNNANAN NCNTTANNGN AAAATANNNN
          1021 GNNNCNNTNN NNNNNNNN
          //

          Please visit Sequencing and PCR primers for primer information.


          References

          Original, user report and related articles

          original Kakimoto, Y., Visualizing multiple inter-organelle contact sites using the organelle-targeted split-GFP system. Sci. Rep. 8 (1): 6175 (2018). PMID 29670150.

          2023.05.01

          GNP_filter3_RDBDEP_html_230501.pl