For the detection of acetylation at the 9th and 14th lysine residues of histone H3 by the BRD4 bromodomain.
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Other clones in our bank
External Database Human BRD4 Mouse Histone 3/n Reference sequence |
Sequence (partial) | RDB14340pka02.seq provided by the depositor |
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Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
Terms and conditions for distribution | In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature designated by the DEPOSITOR is requested. (Nakaoka, S. et al., ACS Chem. Biol., 11 (3), 729-733, 2006) |
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Ordering | Order form [Credit Card Payment ![]() ![]() MTA, for use for not-for-profit academic purpose [Word ![]() Please visit Information of Request for Distribution.[link] |
提供条件 | 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する (Nakaoka, S. et al., ACS Chem. Biol., 11 (3), 729-733, 2006)。 |
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提供依頼 | 提供依頼書 [Word ![]() 提供同意書 (MTA, 非営利学術目的用)[Word ![]() 手続きの概要は、「提供申込みについて[link]」をご覧ください。 |
Catalog # | Resource name | Shipping form | Fee (non-profit org.) |
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RDB14340 | pcDNA3.1(+)-Histac-H3K9/K14 | DNA solution |
Materials & Methods section:
The pcDNA3.1(+)-Histac-H3K9/K14 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB14340). |
Reference section:
Nakaoka, S., Sasaki, K., Ito, A., Nakao, Y., Yoshida, M., A Genetically Encoded FRET Probe to Detect Intranucleosomal Histone H3K9 or H3K14 Acetylation Using BRD4, a BET Family Member. ACS Chem. Biol. 11 (3): 729-733 (2016). PMID 25946208. [link to RRC of NBRP] |
Further references such as user reports and related articles (go to bottom)
Featured content
Featured content | Epigenetics clone (English text) |
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Featured content | Histac for visualization of acetylation of the Histon (English text) |
RIKEN BRC has sequenced portions of this material for quality test.
Please review the QC test results indicated by icon as well as clone information before placing your order.
Test sheet | RDB14340_A6Icp1-2.pdf ![]() |
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Nucleotide sequence of a portion of this resource (if available).
Primer: CMV_Forward (Pr0016) Region: CMV pro, insert 5' (mVenus 5') Sequence file: RDB14340_A6Ice.seq ![]() |
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>D03775A1_A6Ic_1_CMV-Forward_F08_06_ABI08.ab1 1 NNNNNNNNNN NNNNCNNTTG NNGCNNNGGG CGGTAGGCGT GTACGGTGGG AGGTCTATAT 61 AAGCAGAGCT CTCTGGCTAA CTAGAGAACC CACTGCTTAC TGGCTTATCG AAATTAATAC 121 GACTCACTAT AGGGAGACCC AAGCTGGCTA GCGTTTAAAC TTAAGCTTGG TACCATGGTG 181 AGCAAGGGCG AGGAGCTGTT CACCGGGGTG GTGCCCATCC TGGTCGAGCT GGACGGCGAC 241 GTAAACGGCC ACAAGTTCAG CGTGTCCGGC GAGGGCGAGG GCGATGCCAC CTACGGCAAG 301 CTGACCCTGA AGCTGATCTG CACCACCGGC AAGCTGCCCG TGCCCTGGCC CACCCTCGTG 361 ACCACCCTGG GCTACGGCCT GCAGTGCTTC GCCCGCTACC CCGACCACAT GAAGCAGCAC 421 GACTTCTTCA AGTCCGCCAT GCCCGAAGGC TACGTCCAGG AGCGCACCAT CTTCTTCAAG 481 GACGACGGCA ACTACAAGAC CCGCGCCGAG GTGAAGTTCG AGGGCGACAC CCTGGTGAAC 541 CGCATCGAGC TGAAGGGCAT CGACTTCAAG GAGGACGGCA ACATCCTGGG GCACAAGCTG 601 GAGTACAACT ACAACAGCCA CAACGTCTAT ATCACCGCCG ACAAGCAGAA GAACGGCATC 661 AAGGCCAACT TCAAGATCCG CCACAACATC GAGGACGGCG GCGTGCAGCT CGCCGACNAC 721 TACCAGCAGA ACACCCCCAT CGNCGACGGC CCCGTGCTGC TGCCCGACAA CCACTACCTG 781 ANCTACCAGT CCGCCCTGAN CAAAGANCCC AACGAGAAGC GCGNTCACNT GGNCCTGCTG 841 NNNTNCGTGA NCGCCGCCNG GNTCNCTCTC GGNNTGNANN ANCTGTACNA GGAANTNTCC 901 NNNCCTANNN NGCCNNAGAN GNANANNNNN NNANTGNNNN ACNNGNTNNN ANNGNNNNTN 961 NNNNNNTANN GNAANNNNNN NNTNGNNTNN NNNTTNNNGC ANNNNNNNNN N // |
Primer: BGH_rev2 (Pr0606) Region: bGH pA, insert 3' (ECFP 3') Sequence file: RDB14340_A6Icf.seq ![]() |
>D03775A1_A6Ic_1_BGH_rev2_G08_07_ABI08.ab1 1 NNNNNNNNNN NGNNNNNNGG GGGNNGGGCN NACAACAGAN GGCTGGCAAC TAGAAGGCAC 61 AGTCGAGGCT GATCAGCGGG TTTAAACGGG CCCTCTAGAC TCGAGTTACT TGTACAGCTC 121 GTCCATGCCG AGAGTGATCC CGGCGGCGGT CACGAACTCC AGCAGGACCA TGTGATCGCG 181 CTTCTCGTTG GGGTCTTTGC TCAGGGCGGA CTGGGTGCTC AGGTAGTGGT TGTCGGGCAG 241 CAGCACGGGG CCGTCGCCGA TGGGGGTGTT CTGCTGGTAG TGGTCGGCGA GCTGCACGCT 301 GCCGTCCTCG ATGTTGTGGC GGATCTTGAA GTTGGCCTTG ATGCCGTTCT TCTGCTTGTC 361 GGCGGTGATA TAGACGTTGT GGCTGATGTA GTTGTACTCC AGCTTGTGCC CCAGGATGTT 421 GCCGTCCTCC TTGAAGTCGA TGCCCTTCAG CTCGATGCGG TTCACCAGGG TGTCGCCCTC 481 GAACTTCACC TCGGCGCGGG TCTTGTAGTT GCCGTCGTCC TTGAAGAAGA TGGTGCGCTC 541 CTGGACGTAG CCTTCGGGCA TGGCGGACTT GAAGAAGTCG TGCTGCTTCA TGTGGTCGGG 601 GTAGCGGCTG AAGCACTGCA CGCCCCAGGT CAGGGTGGTC ACGAGGGTGG GCCAGGGCAC 661 GGGCAGCTTG CCGGTGGTGC AGATGAACTT CAGGGTCAGC TTGCCGTANG TGGNATCGCC 721 CTCGCCCTCG CCGGACACGC TGAACTTGTG GNCGTTTACG TCGCCGTCCA GCTCGACCAN 781 GNNGGGCACC ACCCCGGTGA ACAGCTCCTC GCCCTTGCTC ANCATGNTAT CNANCACTTT 841 GTACNAGAAA GCTGGGNCGA NAGCCCTCTN CCCGCNGNNG CNANGGGCCA GTTNGATGTC 901 CTTNGGNNTN NNGGNGANNC GCNNNGCGNN NNNNGNNNAC ANGNNNGNNN NNNCAANNNN 961 ANNNNNNNNN N // |
Primer: hBRD4_N_R2 (Pr1042) Region: insert mid (hBRD4 5',mVenus 3') Sequence file: RDB14340_A6Icg.seq ![]() |
>14340_14340_B1HuF_hBRD4_N_R2_E10_05_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNTT CTTNNTTGNT CCNNTATCCN TAGGCGTTTT AATGATCTTA 61 TAGTAATCAG GGAGGTTCAG CTTGACGGCA TCCACAGGCT GCTGGAAAGG CCATGCAAAC 121 TGGTGTTTCC ATAGTGTCTT GAGCACCACT CTGAGCAGGT ATTGCAGTTG GTTGGTCTGC 181 CTCTTGGGCT TGTTAGGGTT GGAGAATTCC TTGTACAGCT CGTCCATGCC GAGAGTGATC 241 CCGGCGGCGG TCACGAACTC CAGCAGGACC ATGTGATCGC GCTTCTCGTT GGGGTCTTTG 301 CTCAGGGCGG ACTGGTAGCT CAGGTAGTGG TTGTCGGGCA GCAGCACGGG GCCGTCGCCG 361 ATGGGGGTGT TCTGCTGGTA GTGGTCGGCG AGCTGCACGC CGCCGTCCTC GATGTTGTGG 421 CGGATCTTGA AGTTGGCCTT GATGCCGTTC TTCTGCTTGT CGGCGGTGAT ATAGACGTTG 481 TGGCTGTTGT AGTTGTACTC CAGCTTGTGC CCCAGGATGT TGCCGTCCTC CTTGAAGTCG 541 ATGCCCTTCA GCTCGATGCG GTTCACCAGG GTGTCGCCCT CGAACTTCAC CTCGGCGCGG 601 GTCTTGTAGT TGCCGTCGTC CTTGAAGAAG ATGGTGCGCT CCTGGACGTA GCCTTCGGGC 661 ATGGCGGACT TGAAGAAGTC GTGCTGCTTC ATGTGGTCGG GGTAGCGGGC GAAGCACTGC 721 AGGCCGTAGC CCAGGGTGGT CACGANGGTG GGCCAGGGCA CGGGCAGCTT GCCGGTGGTG 781 CAGATCAGCT TCAGGGTCAG CTTGCCGTAN GTGGCATCGC CCTCGCNCTC GCCGGACACG 841 CTGAACTTGT GGCCGTTTAC GTCGCCGTCC AGCTCGANCA GGATGGGCAC CACCCCGGTG 901 AACAGCNNCT CGCCCTTGCT CACCANGGTA CCNAGCTNNA GTTTAAACGC TAGCCNGCTT 961 GGNNTCTNCC TATANTGANN CGNANTNNTT NNNANAANNC NNGTAANCAN NNGGNNCNNN 1021 ANNTNNGNNN NNNNNCNNTG CTNANNTANA NNNNCNNNNN NNNNN // |
Primer: mCerulean-N_R (Pr0770) Region: insert mid (ECFP 5',mHisH3,hBRD4 3') Sequence file: RDB14340_A6Ich.seq ![]() |
>14340_14340_B1HuF_mCerulean-N_R_G01_07_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNNN NNNGGGNAGC TTGCCGGTGG TGCAGATGAA CTTCAGGGTC 61 AGCTTGCCGT AGGTGGCATC GCCCTCGCCC TCGCCGGACA CGCTGAACTT GTGGCCGTTT 121 ACGTCGCCGT CCAGCTCGAC CAGGATGGGC ACCACCCCGG TGAACAGCTC CTCGCCCTTG 181 CTCACCATGA TATCAACCAC TTTGTACAAG AAAGCTGGGT CGACAGCCCT CTCCCCGCGG 241 ATGCGACGGG CCAGTTGGAT GTCCTTGGGC ATGATGGTGA CACGCTTGGC GTGGATGGCG 301 CACAGGTTGG TGTCCTCAAA CAGACCCACA AGGTAGGCCT CACAGGCCTC CTGCAGAGCC 361 ATGACTGCCG AGCTCTGGAA GCGCAGGTCG GTCTTGAAGT CCTGCGCGAT CTCGCGCACC 421 AGGCGCTGGA ACGGCAGCTT GCGGATCAGC AGCTCGGTCG ACTTCTGGTA ACGCCGGATC 481 TCGCGCAGCG CCACGGTGCC GGGACGGTAG CGGTGAGGCT TCTTCACGCC GCCGGTAGCC 541 GGGGCGCTCT TGCGGGCGGC CTTGGTGGCC AGCTGCTTAC GCGGGGCCTT GCCACCGGTG 601 GACTTGCGAG CGGTCTGCTT AGTACGAGCC ATGGATCCAG AACCTCCTCC ACCAGATCCA 661 CCTCCTCCGT CGACCACCAC TGGCTCCTCA GGCTCGTCCG GCATCTTGGC AAAGCGCATT 721 TCGAACACAT CCTGGAGCTT GCGGGCCATG GCCACCACCT CATGGTCAGG ANGGTTGTAC 781 TTATAGCANT TGGAGAACAT CAATCGGACG TCAGCACCAA ACTCCTGANC ATCACGGTAC 841 TCACGGGCCT CCAGTTTAGA CTTGATTGTG CTCATGTCCA TGGGGTGCTT GATGATGTCN 901 CAGTAGTCGT GTANNNCCAG TGNCTCCNCG NNCACAGGCT TGTANNANNG NNNNNGCGTN 961 NNNGNGTGCT TCTNGNNNAA NNTCNNCTNN ANNANNNNNC TGCNNCNNTT GANCTGCTNC 1021 NANANNNNNC TGNNNNNNNC NGNNGNNGGN NNCNGCNGNN NNNNNGNNNN NNNNNTNNNN 1081 NNNNNN // |
Primer: attB2-R1 (Pr0411) Region: insert mid (mHisH3,hBRD4 3') Sequence file: RDB14340_A6Ici.seq ![]() |
>14340_14340_B1HuF_attB2-R1_F01_06_ABI08.ab1 1 NNNNNNNNNN NNNNGGCNNG TTGGNNGNCC TTGGGCATGA TGGTGACACG CTTGGCGTGG 61 ATGGCGCACA GGTTGGTGTC CTCAAACAGA CCCACAAGGT AGGCCTCACA GGCCTCCTGC 121 AGAGCCATGA CTGCCGAGCT CTGGAAGCGC AGGTCGGTCT TGAAGTCCTG CGCGATCTCG 181 CGCACCAGGC GCTGGAACGG CAGCTTGCGG ATCAGCAGCT CGGTCGACTT CTGGTAACGC 241 CGGATCTCGC GCAGCGCCAC GGTGCCGGGA CGGTAGCGGT GAGGCTTCTT CACGCCGCCG 301 GTAGCCGGGG CGCTCTTGCG GGCGGCCTTG GTGGCCAGCT GCTTACGCGG GGCCTTGCCA 361 CCGGTGGACT TGCGAGCGGT CTGCTTAGTA CGAGCCATGG ATCCAGAACC TCCTCCACCA 421 GATCCACCTC CTCCGTCGAC CACCACTGGC TCCTCAGGCT CGTCCGGCAT CTTGGCAAAG 481 CGCATTTCGA ACACATCCTG GAGCTTGCGG GCCATGGCCA CCACCTCATG GTCAGGAGGG 541 TTGTACTTAT AGCAGTTGGA GAACATCAAT CGGACGTCAG CACCAAACTC CTGAGCATCA 601 CGGTACTCAC GGGCCTCCAG TTTAGACTTG ATTGTGCTCA TGTCCATGGG GTGCTTGATG 661 ATGTCACAGT AGTCGTGTAG GCCCAGTGCC TCCACGTCCA CAGGCTTGTA GAAGGGCCAG 721 GCGTAGGCGG CGTGCTTCTT GGCAAACATC TCCTTGAGGA TGCCGCTGCA GCACTTGAGC 781 TGCTCCGAGA NCTTGCTGCT CTTCTCTGGT GCTGGGTGCT GCTGAGAGTC NNGCACGTCC 841 TTCTTTGGAN GTTTCACAGG CCGGCTGCTC TCCNGCCGCT GGNCCANCTT GGTGGTCTTG 901 GGCTNCGGGG GCAGCNAGGG TGGCTCGNGN ANTGGGGTCA ATGGTGGNGG GGGGTGGNGG 961 TGNCNGNTTT CCTCTTCNNN NCNNNNNNNT TGNNNNNNNN NGNTGTGGGG NNGNNNGNNN 1021 ANGNNGGGNN NGGGNNNNNN NNNN // |
Primer: SV40pro_F (Pr0110) Region: SV40 pro_ori, NeoR Sequence file: RDB14340_A6Icj.seq ![]() |
>D03775A1_A6Ic_1_SV40pro-F_H06_08_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNNN NNNNNNGTGA GGNNGNTTTT TTGGAGGCCT AGGCTTTTGC 61 AAAAAGCTCC CGGGAGCTTG TATATCCATT TTCGGATCTG ATCAAGAGAC AGGATGAGGA 121 TCGTTTCGCA TGATTGAACA AGATGGATTG CACGCAGGTT CTCCGGCCGC TTGGGTGGAG 181 AGGCTATTCG GCTATGACTG GGCACAACAG ACAATCGGCT GCTCTGATGC CGCCGTGTTC 241 CGGCTGTCAG CGCAGGGGCG CCCGGTTCTT TTTGTCAAGA CCGACCTGTC CGGTGCCCTG 301 AATGAACTGC AGGACGAGGC AGCGCGGCTA TCGTGGCTGG CCACGACGGG CGTTCCTTGC 361 GCAGCTGTGC TCGACGTTGT CACTGAAGCG GGAAGGGACT GGCTGCTATT GGGCGAAGTG 421 CCGGGGCAGG ATCTCCTGTC ATCTCACCTT GCTCCTGCCG AGAAAGTATC CATCATGGCT 481 GATGCAATGC GGCGGCTGCA TACGCTTGAT CCGGCTACCT GCCCATTCGA CCACCAAGCG 541 AAACATCGCA TCGAGCGAGC ACGTACTCGG ATGGAAGCCG GTCTTGTCGA TCAGGATGAT 601 CTGGACGAAG AGCATCAGGG GCTCGCGCCA GCCGAACTGT TCGCCAGGCT CAAGGCGCGC 661 ATGCCCGACG GCGAGGATCT CGTCGTGACC CATGGCGATG CCTGCTTGCC GAATATCATG 721 GTGGAAAATG NNCGCTTTTC TGGANTCATC GACTGTGGNC GGCTGGGTGT GGCGGACCGC 781 TATCAGGACA TAGCGTTGGC TACCCGTGAT ATTGCTGAAN AGCTTGGCGG CGAATGGGCT 841 GANCGCTTCC TCGNGCTTTA CGGNATCNCC GCTCCCGATN CGCAGCGCAT CGCCTTCTAT 901 CGCCTNCTTG ANNAGTTCTT CTNANCGGGN NTCTNGGGTT CGAAATGNNC GANCNANCNN 961 CGCCCNANNT GNCATCACNA GNNTNCNNNN NCNNNGCCNN NNNCNATNNA NNNNNNGGCN 1021 NNNNNNNNN // |
Please visit Sequencing and PCR primers for primer information.
Original, user report and related articles
original | Nakaoka, S., A Genetically Encoded FRET Probe to Detect Intranucleosomal Histone H3K9 or H3K14 Acetylation Using BRD4, a BET Family Member. ACS Chem. Biol. 11 (3): 729-733 (2016). PMID 25946208. [link to RRC of NBRP] |
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reference | He, M., Chemical Biology Approaches for Investigating the Functions of Lysine Acetyltransferases. Angew. Chem. Int. Ed. Engl. 57 (5): 1162-1184 (2018). PMID 28786225. |
reference | Soleja, N., Role of green fluorescent proteins and their variants in development of FRET-based sensors. J. Biosci. 43 (4): 763-784 (2018). PMID 30207321. |
2023.11.23
GNP_filter3_RDBDEP_html_231027.pl