Complete genome of BK virus, lineage Ic
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External Database Hum_Polyoma BKV Reference sequence |
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Terms and conditions for distribution | In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature(s) designated by the DEPOSITOR is requested. (J. Mol. Evol., 63, 341-352 (2006)) |
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Ordering | Please visit Information of Request for Distribution.[link] For for-profit-research purpose, please contact us. Order form [Credit Card Payment] [Bank Transfer Payment] Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word] |
提供条件 | 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する (J. Mol. Evol., 63, 341-352 (2006))。 |
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提供依頼 | 手続きの詳細は、「提供申込みについて[link]」をご覧ください。営利目的利用についてはお問い合わせください。 提供依頼書 [Word] 提供同意書 (MTA、非営利機関による非営利学術研究用)[Word] |
Catalog # | Resource name | Shipping form | Fee (non-profit org.) |
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RDB07265 | pTHK-9 | DNA solution |
Materials & Methods section:
The pTHK-9 was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB07265). |
Reference section:
Further references such as user reports and related articles (go to bottom)
Featured content
RIKEN BRC has sequenced portions of this material for quality test.
Please review the QC test results indicated by icon as well as clone information before placing your order.
Test sheet | RDB07265_A8F5p1-2.pdf |
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Nucleotide sequence of a portion of this resource (if available).
Primer: reverse-2 (Pr0100) Region: insert 5' Sequence file: RDB07265_A8F5a.seq |
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>07265_07265_A8F5_3_Reverse2_G02_20_ABI24.ab1 1 AAAAACAGCA TTACGCCAAG CTTGCATGCC TGCAGGTCGA CTCTAGAGGA TCCCCCATTT 61 CTGGGTTTAG GAAGCATTCT ACCTCTGTTA TAGCATCTAC CCCAGTTTTA ACTTCTAGAA 121 CTTCTACTCC TCCTTTTATT AGTAGTTTTG GCACTTGCAC GGGGTCCTTT GGCTTTTTGG 181 GAGCTGCCCC TGGACACTCT CCTTTTCTTT TGGTTGGGGC CATCTTCATA TGCTTCAAGA 241 GCAGGTGTTA CAGTCCCGTA CAGGCCTAGA AGTAAAGGCA ACATCCATTG AGGAGCAGTT 301 CTTTGATTAG CACCTCCTGG GGCAATAGTT TTTTCTATAA ACTCTCCTGA ATGTACACTT 361 TGTTGATTTC TTAAGTCCAT TCTTTGTGTA ACTTCTTCTA TACTGTCAGC ATCATCTATA 421 CTATAAGTAT GGCCAAAATG TACACGGGTA CCTTCCCTTT CAGCTACTTG TCTAACCATT 481 GAGGGCCTAA TAGGGGAAAG ATCAGAATAA TATTCCTGAA TATAATTATA AAAGTTTATA 541 GGGGCATTTA CAATTGTCCA GGTAGTTTCC TCCAAAAATC TAGCCAAGGA GTCTCTAAAA 601 AATCTTTCTG TTCTTCTTTG TAATTCTTGT GAGGTTATAG CAGGTATATC ATCCCTAATA 661 ACATGCCACA AAGCCTGGGA AATAGTAGCA AACAAAGAAG GACCCCAATG CCTAGGATCA 721 AGGTATTGAA TATTATTTAC AAAAGTATTT ACACCAGGAA ACAAAATATC ATAGTACTCA 781 TCTGGGTTAA ACAATTCCAA AGCCATGCCT GATTGCTGAT AGAGGCCTAC AGTGGAAACT 841 TTGTGATCCC AATCACTAAA GAACCTATAC CCTACTTGAG CCAAGGAACT AACACCAGTA 901 ACAGTTTGAA TTAAAGCAGC AAACCCAGCA ATAGCCCCCA GGAGCACCAG CAATTACAGC 961 ATATGTTTGA GGGAGTTAGG CCTATAGCAG CTATAGCCCT CTGAGGTACT TTGATATGCC 1021 CTCTACAGTA GCAAGGAATG CAATTTGGAC CTTTCTATAG CAGCAGCAGT CCTTCGCCAA 1081 GGCCAGCCAA TTCCAGAC // |
Primer: M13_-40 (Pr0410) Region: insert 3' Sequence file: RDB07265_A8F5b.seq |
>07265_07265_A8F5_3_M13_-40_H02_23_ABI24.ab1 1 CAGGCGGTAA TCGGAGCTCG GTACCGGGGA TCCAGATGAA AACCTTAGGG GCTTTAGTCT 61 AAAGCTAAGT GCTGAAAATG ACTTTAGCAG TGATAGCCCT GAGAGAAAAA TGCTTCCCTG 121 TTACAGCACA GCAAGAATTC CCCTCCCCAA TTTGAATGAG GACCTAACCT GTGGAAATCT 181 CCTGATGTGG GAGGCTGTAA CTGTACAAAC AGAGGTTATT GGAATAACTA GCATGCTTAA 241 CCTTCATGCA GGGTCACAAA AAGTACATGA GCATGGTGGA GGGAAGCCTA TTCAAGGCAG 301 TAATTTCCAC TTCTTTGCTG TTGGTGGAGA CCCCTTGGAA ATGCAGGGAG TGCTAATGAA 361 TTACAGGACA AAGTACCCAG AAGGTACTAT AACTCCAAAA AACCCAACAG CCCAGTCCCA 421 GGTAATGAAT ACTGACCATA AGGCCTATTT GGACAAAAAC AATGCTTATC CAGTTGAGTG 481 CTGGATTCCT GATCCCAGTA GAAATGAAAA TACTAGGTAT TTTGGGACTT TGACAGGAGG 541 GGAAAATGTT CCCCCAGTAC TTCATGTGAC CAACACAGCT ACCACAGTGT TGCTAGATGA 601 ACAGGGTGTG GGGCCTCTTT GTAAAGCTGA TAGCCTGTAT GTTTCAGCTG CTGATATTTG 661 TGGCCTGTTT ACTAACAGCT CTGGAACACA ACAGTGGAGA GGCCTTGCAA GATATTTTAA 721 GATTCGCCTG AGAAAAAGAT CTGTAAAGAA TCCTTACCCA ATTTCCTTTT TGCTGAGTGA 781 CCTTATAAAC AGGAGAACCC AGAGAGTGGA TGGGCAGCCT ATGTATGGTA TGGAATCCCA 841 GGTAGAAGAG GTCAGGGTGT TTGATGGCAC AGAAAAAACT TCCAGGGGGA CCCAGATATG 901 ATAAGATATA TTGACAAACA AGGACAATTG CAAACCAAAA TGCTTTTAAA CAGGTGCTTT 961 TTATTGTACA TATACATTTT AAATAAATGC TGCTTTTTGT ATAAGCCCAC TTTTTAAGCT 1021 TTGTGGTTAT TTTTGGGGGG TGGTTGGTTT TTAGTCCGTT TTAAAACACT GGAAGCGATT 1081 TACAACAAAT GCAACCTCTT TTG // |
Primer: Bkvirus_F1 (Pr0564) Region: insert mid Sequence file: RDB07265_A8F5c.seq |
>07265_07265_A8F5_3_BKvirus_F1_D03_12_ABI24.ab1 1 TCTGTTTTCT GAATCTTTCT TCTCTTGTGA TATCAAGAAT ACATTTCCCC ATGCATATAT 61 TATATTTCAT CCTTGAAAAA GTATACATAC TTATCTCAGA ATCCAGCCTT TCCTTCCATT 121 CAACAATTCT AGATTGTATA TCTGTTGCAA AATCAGCTAC AGGCCTAAAC CAAATTAGCA 181 GTAGCAATAA GGTCATTCCA CTTTGTAAGA TTCTTTTTTC AAGTAAAAAC TCTGAGTTTT 241 GTAAGGATTT TCTTAAATAT ATTTTGGGCC TAAAATCTAT CTGTCTTACA AATCTAGCCT 301 GCAGGGTTTT AGGGACAGGA TACTCATTCA TTGTAACCAA GCCTGGAGGA AATATTTGGG 361 TTCTTTTGTT TAAATGTTTC TTTTCTAAAT TAACCTTAAC ACTTCCATCT AAATAATCTC 421 TGAGACTGTC TAAATTGTTT ATTCCATGTC CTGAAGGCAA ATCCTTTGAT TCAGCCCCTG 481 TCCCTTTTAC ATCTTCAAAA ACAACCATGT ACTGATCTAT AGCTACACCT AGTTCAAAGG 541 TTAGCCTTTC CATGGGTAGG TTTACATTTA AGGCTTTACC TCCACACAAA TCTAATAACC 601 CTGCAGCTAG TGTTGTTTTT CCACTATCAA TAGGACCTTT AAATAACCAG TATCTTCTTT 661 TAGGTACATT AAAAACAATA CAGTGCAAAA AATCAAATAT AACAGAATCC ATTTTAGGTA 721 GCAAACAGTG CAGCCAAGCA ACACCTGCCA TATATTGTTC TAGTACAGCA TTTCCATGAG 781 CTCCAAATAT TAAATCCATT TTATCTAATA TATGATTAAA TCTTTCTGTT AGCATTTCTT 841 CTCTGGTCAT ATGAAGGGGT ATCTACTCTT TTTTTTAGCT AAAACTGTAT CTACTGCTTG 901 CTGACAAATA CTTTTTTGAT TTTTTACTTT TCTGCAAAGA TAGTAGCATT TTGCAAAAAT 961 GCTTTTCATG ATACTTAAAG TGATAAAGGT TGGTTCTTTT TTTCTGACAC TTTTTTTACA 1021 CTCGTCTACA TTGTTATTGA AACTTCCTAA TACATACCTA ATAAATTAAA ACACATTCCG 1081 TTCACCACCT TTTGTTCCTC TTACTTGGCC AT // |
Please visit Sequencing and PCR primers for primer information.
Original, user report and related articles
original | Nishimoto, Y., Evolution of BK virus based on complete genome data. J. Mol. Evol., 63, 341-352 (2006). PMID 16897259. |
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2023.05.01
GNP_filter3_RDBDEP_html_230501.pl