Resource data sheet
Prev.
Please review the QC test results indicated by check icon below as well as clone information before placing your order.

pMT/cl 8

Complete genome of BK virus, lineage Ic

Catalog number RDB07256
Resource name pMT/cl 8
Clone info. Complete genome of BK virus, lineage Ic. BKV genomic DNA derived from the urine of a Japanese systemic lupus erythematosus patient.
Vector backbone pBR322 (Plasmid)
Size of vector backbone 4.3 kb
Selectable markers Amp^r
Gene/insert name Hum_Polyoma BKV genomic DNA
Reference of insert sequence AB485696 (DDBJ accession number)
Depositor|Developer Yogo, Yoshiaki |
Other clones in our bank

External Database
Hum_Polyoma BKV

            Reference sequence
              

            Distribution information

            Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
            Terms and conditions set forth by the DEPOSITOR In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature(s) designated by the DEPOSITOR is requested (J. Virol., 63, 3195-3199 (1989)).
            Ordering Please visit Information of Request for Distribution.[link] 
            Order form 
            [Credit Card Payment]  [Bank Transfer Payment]
            Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word]
            提供案内 (日本国内) [open/close]

            提供条件 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する (J. Virol., 63, 3195-3199 (1989))。
            提供依頼 手続きの詳細は、「提供申込みについて[link]」をご覧ください。
            提供依頼書 [Word]
            提供同意書 (MTA、非営利機関による非営利学術研究用)[Word]

            Catalog # Resource name Shipping form Fee (non-profit org.)
            RDB07256 pMT/cl 8 DNA solution

            Ordering Information [in Japanese] [in English]
            Please review the QC test results indicated by check icon below as well as clone information before placing your order.

            References and tips

            Electronic file

            Original reference

            original Sugimoto, C., Growth efficiency of naturally occurring BK virus variants in vivo and in vitro. J. Virol., 63, 3195-3199 (1989). PMID 2542627.

            Further references such as user reports and related articles (go to bottom)

            Featured content


            Sequence information

            RIKEN BRC has sequenced portions of this material for quality test.
            Please review the QC test results indicated by check icon as well as clone information before placing your order.

            Test sheet RDB07256_A3Kj.pdf check

            Nucleotide sequence of a portion of this resource (if available).

            Primer:
            Sequence file: RDB07256_A3Kja.seq check
            >07256_07256_A3Kj_2_Amp_R_E11_14.ab1
                1 GCCTCTTTTT TAATAATTAT TGAAGCATTT ATCAGGGTTA TTGTCTCATG AGCGGATACA
               61 TATTTGAATG TATTTAGAAA AATAAACAAA TAGGGGTTCC GCGCACATTT CCCCGAAAAG
              121 TGCCACCTGA CGTCTAAGAA ACCATTATTA TCATGACATT AACCTATAAA AATAGGCGTA
              181 TCACGAGGCC CTTTCGTCTT CAAGAATTCT CATGTTTGAC AGCTTATCAT CGATAAGCTT
              241 TAATGCGGTA GTTTATCACA GTTAAATTGC TAACGCAGTC AGGCACCGTG TATGAAATCT
              301 AACAATGCGC TCATCGTCAT CCTCGGCACC GTCACCCTGG ATGCTGTAGG CATAGGCTTG
              361 GTTATGCCGG TACTGCCGGG CCTCTTGCGG GATATCGTCC ATTCCGACAG CATCGCCAGT
              421 CACTATGGCG TGCTGCTAGC GCTATATGCG TTGATGCAAT TTCTATGCGC ACCCGTTCTC
              481 GGAGCACTGT CCGACCGCTT TGGCCGCCGC CCAGTCCTGC TCGCTTCGCT ACTTGGAGCC
              541 ACTATCGACT ACGCGATCAT GGCGACCACA CCCGTCCTGT GGATCCCCCA TTTCTGGGTT
              601 TAGGAAGCAT TCTACCTCTG TTATAGCATC TACCCCAGTT TTAACTTCTA GAACTTCTAC
              661 TCCTCCTTTT ATTAGTAGTT TTGGCACTTG CACGGGGTCC TTTGGCTTTT TGGGAGCTGC
              721 CCCTGGACAC TCTCCTTTTC TTTTGGTTGG GGCCATCTTC ATATGCTTCA AGAGCAGGTG
              781 TTACAGTCCC GTACAGGCCT AGAAGTAAAG GCAACATCCA TTGAGGAGCA GTTCTTTGAT
              841 TAGCACCTCC TGGGGCAATA GTTTTTTCTA TAAACTCTCC TGAATGTATA CTTTGTTGAT
              901 TTCTTAAGTC CATTCTTTGT GTAACTTCTT CTATACTGTC AGCATCATCT ATACTATAAG
              961 TATGGCCAAA ATGTACACGG GTACCTTCCC TTTCAGCTAC TTGTCTAACC ATTGAGGGCC
             1021 TAATAGGGAA AGATCAGAAA TAATATTTCT GAATATAATT ATAAAGTTTA TAGGGCATTT
             1081 ACATTGTCCA GGGTAGTTTC CTCCAAATCT AAGCCCAAGG AGTCTCTAAA AATCCTTTCT
            1141 GTTCTTCTTG TAATTCCTGT GAGTTAATAG GCAAGGTATA TAATTCAATT CCCCCTTAT
            //
            Primer:
            Sequence file: RDB07256_A3Kjb.seq check
            >07256_07256_A3Kj_pBR322_BamHI_R_F08_17.ab1
                1 ACTTGAAGGG GCCCTTTAGT CTAAGCTAAG TGCTGAAATG ACTTTAGCAG TGATAGCCCA
               61 GAGAGAAAAA TGCTTCCCTG TTACAGCACA GCAAGAATTC CCCTCCCCAA TTTGAATGAG
              121 GACCTAACCT GTGGAAATCT CCTGATGTGG GAGGCTGTAA CTGTACAAAC AGAGGTTATT
              181 GGAATAACTA GCATGCTTAA CCTTCATGCA GGGTCACAAA AAGTACATGA GCATGGTGGA
              241 GGGAAGCCTA TTCAAGGCAG TAATTTCCAC TTCTTTGCTG TTGGTGGAGA CCCCTTGGAA
              301 ATGCAGGGAG TGCTAATGAA TTACAGGACA AAGTACCCAG AAGGTACTAT AACTCCAAAA
              361 AACCCAACAG CCCAGTCCCA GGTAATGAAT ACTGACCATA AGGCCTATTT GGACAAAAAC
              421 AATGCTTATC CAGTTGAGTG CTGGATTCCT GATCCCAGTA GAAATGAAAA TACTAGGTAT
              481 TTTGGGACTT TGACAGGAGG GGAAAATGTT CCCCCAGTAC TTCATGTGAC CAACACAGCT
              541 ACCACAGTGT TGCTAGATGA ACAGGGTGTG GGGCCTCTTT GTAAAGCTGA TAGCCTGTAT
              601 GTTTCAGCTG CTGATATTTG TGGCCTGTTT ACTAACAGCT CTGGAACACA ACAGTGGAGA
              661 GGCCTTGCAA GATATTTTAA GATTCGCCTG AGAAAAAGAT CTGTAAAGAA TCCTTACCCA
              721 ATTTCCTTTT TGCTGAGTGA CCTTATAAAC AGGAGAACCC AGAGAGTGGA TGGGCAGCCT
              781 ATGTATGGTA TGGAATCCCA GGTAGAAGAG GTCAGGGTGT TTGATGGCAC AGAAAAACTT
              841 CCAGGGGACC CAGATATGAT AAGATATATT GACAAACAAG GACAATTGCA AACCAAAATG
              901 CTTTAAACAG GTGCTTTTAT TGTACATATA CATTTAATAA AATGCTGCTT TTGTATAAGC
              961 CACTTTTAAG CTTGTGTTAT TTTGGGGGTG GTGTTTTAGG CCTTTTAAAC ACTGGAAGCC
             1021 TTTACACAAA TGCAACTCTT GACTATGGGG GGTCTGACCT TTGGGAATCT TCAGCAGGGG
             1081 CTGAAGTATC TGAGAACTTG GAAGAGCAAT TTGTGAATGG GAATCCAGTT GCCTGATTCA
            1141 ATGGTCAGAG TCTTCCAGAT TCTTGCAATC CTTTCTCTTC TTCGTTGTG
            //

            Please visit Sequencing and PCR primers for primer information.


            References

            Original, user report and related articles

            original Sugimoto, C., Growth efficiency of naturally occurring BK virus variants in vivo and in vitro. J. Virol., 63, 3195-3199 (1989). PMID 2542627.

            2022.02.09

            GNP_filter3_RDBDEP_html_220112.pl