Sequencing and PCR primers for primer information.
Complete genome of JC virus, PML-type
| Catalog number | RDB07250 |
|---|---|
| Resource name | pNY-1A |
| Clone info. | Complete genome of JC virus, PML-type. JCV genomic DNA derived from the brain of an American PML patient. |
| Vector backbone | pUC19 (Plasmid) |
| Size of vector backbone | 2,690 bp |
| Selectable markers | Amp^r |
| Gene/insert name | Hum_Polyoma JCV genomic DNA |
| Reference of nucleotide sequence | D12574 (DDBJ accession number) |
| Depositor | Yogo, Yoshiaki | |
Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
| Terms and conditions set forth by the DEPOSITOR | In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature(s) designated by the DEPOSITOR is requested (Virus Genes., 8, 99-105 (1994)). |
|---|---|
| Ordering | Please visit Information of Request for Distribution. Order form [Credit Card Payment] [Bank Transfer or Check Payment] Material Transfer Agreement (MTA) [Word] |
[open/close]| Catalog # | Resource name | Shipping form | Fee (non-profit org.) |
|---|---|---|---|
| RDB07250 | pNY-1A | DNA solution |
Electronic file
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References
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RIKEN BRC has sequenced portions of this material for quality test. Primers and the results are shown below.
Data are summerized on test sheet below.
| Test sheet | RDB07250_A3Kj.pdf |
|---|
Nucleotide sequence of a portion of this resource (if available).
| Primer: | RDB07250_A3Kja.seq |
|---|---|
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>07250_07250_A3Kj_2_M13(-40)_B01_04.ab1 1 CGGAGCGGCG TTATTTCGGA GCTCGGTACC GGGGATCCCA ACACTCTACC CCACCTAAGA 61 AGAAAAAAAA GGTAGAAGAC CCTAAAGACT TTCCTGTAGA TCTGCATGCA TTCCTCAGTC 121 AAGCTGTGTT TAGTAATAGA ACTGTTGCTT CTTTTGCTGT GTATACCACT AAAGAAAAAG 181 CTCAAATTTT ATATAAGAAA CTTATGGAAA AATATTCTGT AACTTTTATA AGTAGACATG 241 GTTTTGGGGG TCATAATATT TTGTTTTTCT TAACACCACA TAGACATAGA GTGTCAGCAA 301 TTAATAACTA CTGTCAAAAA CTATGTACCT TTAGTTTTTT AATTTGTAAA GGTGTGAATA 361 AGGAATACTT GTTTTATAGT GCCCTGTGTA GACAGCCATA TGCAGTAGTG GAAGAAAGTA 421 TTCAGGGGGG CCTTAAGGAG CATGACTTTA ACCCAGAAGA ACCAGAAGAA ACTAAGCAGG 481 TTTCATGGAA ATTAGTTACA CAGTATGCCT TGGAAACCAA GTGTGAGGAT GTTTTTTTGC 541 TTATGGGCAT GTACTTAGAC TTTCAGGAAA ACCCACAGCA ATGCAAAAAA TGTGAAAAAA 601 AGGATCAGCC AAATCACTTT AACCATCATG AAAAACACTA TTATAATGCC CAAATTTTTG 661 CAGATAGCAA AAATCAAAAA AGCATTTGCC AGCAGGCTGT TGATACTGTA GCAGCCAAAC 721 AAAGGGTTGA CAGCATCCAC ATGACCAGAG AAGAAATGTT AGTTGAAAGG TTTAATTTCT 781 TGCTTGATAA AATGGACTTG ATTTTTGGGG CACATGGCAA TGCTGTTTTA GAGCAATATA 841 TGGCTGGGGT GGCCTGGATT CATTGCTTGC TGCCTCAAAT GGACACTGTT ATTTATGACT 901 TTCTGAAATG CATTGTATTA AACATTCCAA AAAAAAAGGT ACTGGCTATT CAAGGGGCCA 961 ATAGACAGTG GCAAAACTAC TTTAGCTGCA GCTTTACTTG ATCTCTGTGG GGGGAAGTCA 1021 TTAAATGTTA ATATGCCATT AGAAAGATTA AACTTTGAGT TAGAGTGGTA TAGATCAGTT 1081 TATGGTTGGT ATTTTGAGGA TGTAAAAGCA CTGGTGCAAG TTCAGGATTT CATCGTCAGC 1141 ATGACCATAA GCCAAATCGG CT // |
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| Primer: | RDB07250_A3Kjb.seq |
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>07250_07250_A3Kj_2_Reverse2_B04_04.ab1 1 GAACCCGGAA TTACGCCAAG CTTGCATGCC TGCAGGTCGA CTCTAGAGGA TCCTGTGTTT 61 TCATCATCAC TGGCAAACAT TTCTTCATGG CAAAACAGGT CTTCATCCCA CTTCTCATTA 121 AATGTATTCC ACCAGGATTC CCATTCATCT GTTCCATAGG TTGGCACCTA AAAAAAAACA 181 ATTAAGTTTA TTGTAAAAAA CAAAATGCCC TGCAAAAGAA AAATAGTGGT TTACCTTAAA 241 GCTTTAGATC CCTGTAGGGG GTGTCTCCAA GAACTTTCTC CCAGCAATGA AGAGCTTCTT 301 GGGTTAAGTC ACACCCAAAC CATTGTCTGA AGCAATCAAA GCAATAGCAA TCTATCCACA 361 CAAGTGGGCT GCTTCTTAAA AATTTTCTGT TTCTATGCCT TAATTTTAGC ATGCACATTA 421 AACAGGGGCA ATGCACTGAA GGATTAGTGG CACAGTTAGG CCATTCCTTG CAATAAAGGG 481 TATCAGAATT AGGAGGAAAA TCACAACCAA CCTCTGAACT ATTCCATGTA CCAAAATCAG 541 GCTGATGAGC AACTTTTACA CCTTGTTCCA TTTTTTTATA TAAAAAATTC ATTCTCTTCA 601 TCTTGTCTTC GTCCCCACCT TTATCAGGGT GGAGTTCTTT GCATTTTTTC AGATAAGCTT 661 TTCTCATGAC AGGAATGTTC CCCCATGCAG ACCTATCAAG GCCTAATAAA TCCATAAGCT 721 CCATGGATTC CTCCCTATTC AGCACTTTGT CCATTTTAGC TTTTTGCAGC AAAAAATTAC 781 TGCAAAAAAG GGAAAAACAA GGGAATTTCC CTGGCCTCCT AAAAAGCCTC CACGCCCTTA 841 CTACTTCTGA GTAAGCTTGG AGGCGGAGGC GGCCTCGGCC TCCTGTATAT ATAAAAAAAA 901 AGGGAAGGTA GGGAGGAGCT GGCTAAAACT GGATGGGCTG CCCAGCCAAG CATGAGCTCA 961 TACCTAGGGG AGCCCAACCA GCTGACAGCC AGAGGGAGCC CTGGGCTGCA TGCCACTGGC 1021 AGTTTATAGT GAAACCCCTT CCCATAGTCC CTTAATCACA AGTAACAAGC ACAGGGAAAG 1081 TGTCATGTGG CATGCCTGGT CCACCTTGGT TGGGACCATG TTTTTGCGAG CCCAGAAAGC 1141 CTGATATG // |
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Please visit Sequencing and PCR primers for primer information.
References
2018.12.10
GNP_filter3_RDBDEP_html_181012.pl