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RIKEN DNA Bank Mouse Resource - Trp53

Gene ID NCBI Gene 22059 |  KEGG mmu:22059
Gene Symbol Trp53
Protein Name transformation related protein 53
Synonyms Tp53|bbl|bfy|bhy|p44|p53
Featured content DNA damage
Featured content Rb pathway
Featured content Wnt signaling pathway (mouse)
Featured content Sphingolipid signaling pathway (mouse)
Featured content Apoptosis - mouse
Featured content Huntington disease - mouse
Featured content Amyotrophic lateral sclerosis (ALS) - mouse
Featured content Mitophagy - mouse
Ortholog resource in our bank

  Trp53

External dsatabase

  KEGG gene

  KEGG Ortholog

  NCBI Gene

Individualy Deposited Resource

Catalog number Name of Resource Description
RDB01284 p53-LTR pUC18 (Sense#3) Expression vector, Sense p53, cDNA
RDB01285 p53-LTR pUC18 (Anti Sense#9) Expression vector, Antisense p53, cDNA
RDB12966 CS-mp53-shRNA-CG Lentivirus vector plasmid of shRNA targeting mouse Trp53 with GFP marker.
RDB16062 pT2/shp53/shNf1/SV40-GFP The Sleeping Beauty (SB) transposon system clone. Expression vector of shRNAs against mouse shNf1/shp53.
RDB16063 pT2/shp53/shNf1/CMV-PDGFA-IRES-DsRed The Sleeping Beauty (SB) transposon system clone. Expression vector of human PDGFA and shRNAs against mouse shNf1/shp53.
RDB18331 phBG-p53DD Plasmid vector for in-vitro transcription of a dominant negative form of the mouse Trp53 (P53DD)

webcatalog20220516.tab

NIA/NIH Mouse cDNA Clone

Plasmid request [in Japanese] [in English]

Catalog number Clone name Vector Sequence Status
5' terminal EST, submitted in DDBJ(1) 3' terminal EST, submitted in DDBJ(1)
MCH056879 H3142D07 pSPORT1 BG075029  

♦ Full length sequence is not available. The clone could differ from the NCBI mRNA reference sequence.
(1) Actual EST sequence either 5' or 3' terminal end. Data were submitted to the DNA Data Bank of Japan (DDBJ).
♦ NIA/NIH Mouse cDNA clone was deposited by Dr Minoru Ko (Tanaka et al., PNAS 97, 9127-9132, 2000. VanBuren V, et al. Genome Research 12, 1999-2003, 2002) at the National Institute on Aging, the National Institutes of Health, U.S.A.

NIAmouse22k_2023May31.csv

Mouse BAC clone

Clone request [in Japanese] [in English]

BAC clone search [map around Gene ID 22059] (link to our BAC browser)

♦ Every single our BAC clones have analyzed their terminal end sequences to map on the genome. Most of them are assigned by both ends and indicated with blue line on the genome browser (they likely contain the region). Others are assigned only by a single end and indicated with red line on the genome browser (containing piece is unsure).
♦ Reasons that we did not use the other end result for mapping are: (1) Data was not suitable for BLAST analysis (short read, repeats, no data or such stuff); (2) Result of BLAST analysis is unlikely [two ends are, too far away (>0.3 Mb), distinct chromosome, same orientation, or such incomprehensible].
♦ Full length sequence is not available.

2023.12.13

Mus_musculus_gene_info230514.csv - RDB_mmu_GIxxxxxxxxx_html_220215.pl